| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4778 |
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| Symbol | |
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| ID | 6119155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5767534 |
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| End bp | 5768757 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636359 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_001763122 |
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| Protein GI | 170729096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000014689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAACACAG TTTATTCAAT TGGCGAGCTT GAGTCGTTTT TAGTCGCAAT TTTAGTGCTC
TTTATTGGGC ACTCTATTAA TCGTCATGTG CCTTTTTTCA GAAAGTATAA TATTCCTGAG
CCCATCGTTG GTGGTTTGAT TGTCGCGGCT ATTATCACCA TTTTGCATTT CAACAATATT
ACCCTCGCGT TTACTCTTTC GATGCAGAAA ACATTAATGT TGATGTTTTT CAGTACCGTA
GGTTTGGCCG CAAACTATAA GTTGTTGCTT AAAGGTGGCT CTAAGGTTTT TCTATTTCTA
GGGATCGCGT CTCTGTTTAT TCTTATTCAG AATGCTGTCG GTGTCAGTAT GGCGACCGCG
TTGGGTTTAG AGCCTTTAAT GGGGCTGATT GCCGGTTCTA TTACGTTGTC CGGTGGCCAT
GGAACTGGAG TTGCTTGGGC GCATACCTTC CAGGAGAACT ATGGGATCAA TACCTTAGAG
TTCGCAATGG CGGCGGCAAC CTTTGGCTTA GTGATGGGCG GGATCATCGG TGGTCCAGTC
GCTCAAAGGT TGATCAATAA GAATAATTTG GTCTCCTCTT ACGGTGTCGG TGGTAATCAC
CATAAAGATC ATCCAGATCT AGTGACCTAT GATCAGTTGG AAGAGGATAG GGTGACAGCC
AAAAGCATTT TGGAGGTGAT GTTTATTCTG CTTCTGTGTG TATCTGGTGC TAAATGGGTT
GCGACGCTTA TCTCTAGCTC GGGCATTAGC TGGCTAAAGA TGCCTGAATT TGTCTATGCC
CTGTTTATCG GGGTGGTGAT CACCAATATT ACTGAGCTGT CCCATGGTTA TAAAATAAAG
AGTGAGAGTG TCGATGTACT CGGTACTGTC TCTTTGTCGC TGTTTTTAGC CATGGCTTTG
ATGAATTTAA AGCTGTGGGA GATATTTGAC CTTGCACTGC CTCTATTGGC TATTTTGTTG
GTGCAAACAG TAACCTTAGC GTTGTTCGCT TACTTCATCA CCTTTAGGTT AATGGGTAGA
AACTATGATG CCGCTGTGAT GGCGGGTGGC CACTGTGGTT TTGGTATGGG GGCTACACCT
ACGGCTGTGA TGAACATGGG AGCACTTGTT TCGAGGACGG GCCCATCGCC TCAGGCCTTT
ATGGTTGTGC CAATTGTGGG CGCCTTCTTT ATCGATATCG TTAACGCCAT TATCTTGCAG
GGTTACCTCA GTTTTATTGG CTAA
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| Protein sequence | MNTVYSIGEL ESFLVAILVL FIGHSINRHV PFFRKYNIPE PIVGGLIVAA IITILHFNNI
TLAFTLSMQK TLMLMFFSTV GLAANYKLLL KGGSKVFLFL GIASLFILIQ NAVGVSMATA
LGLEPLMGLI AGSITLSGGH GTGVAWAHTF QENYGINTLE FAMAAATFGL VMGGIIGGPV
AQRLINKNNL VSSYGVGGNH HKDHPDLVTY DQLEEDRVTA KSILEVMFIL LLCVSGAKWV
ATLISSSGIS WLKMPEFVYA LFIGVVITNI TELSHGYKIK SESVDVLGTV SLSLFLAMAL
MNLKLWEIFD LALPLLAILL VQTVTLALFA YFITFRLMGR NYDAAVMAGG HCGFGMGATP
TAVMNMGALV SRTGPSPQAF MVVPIVGAFF IDIVNAIILQ GYLSFIG
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