Gene Swoo_4775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4775 
Symbol 
ID6119152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5764607 
End bp5765479 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content48% 
IMG OID641636356 
Producthypothetical protein 
Protein accessionYP_001763119 
Protein GI170729093 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000121988 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCAGATA ATCACTTAGT GGGCGCAGGC ATTGGCCTGC GACTCCCTCA TGTGCAGGAG 
ATTTTAGCAG CAGGGCAGAC AGGTATTCCC TGGTTTGAGG TCTTGGTGGA TAACTGGCTT
GTCGAGGGGG GATTGAATAA ACGAATGCTA CAGGAGGTCT GTGAGCGTTA CCCCATAGTG
CTCCATAGTG TGGGGCTCTC CTTGGGAGGG CTATCTCCTC TAGATTTAGA TTATCTAAAG
CAGGTTAAGG CACTGAAGCG GGAGACCGGA GCCATCTGGT ATTCCGAACA CGCCAGTTTC
TCTGGCAATA ACGATTTTAA AGTGCCGGAT CTGTTGCCAT TGCCCTATAC CGAAGAGGCC
GTTGATCATC TAAGTCAACG TATTATGCAG GTGCAGGAGT TTATGGGTGA AAGAATTCTG
TTGGAAAACG TGTCTACCTA TCTAAGTTGC CAATTTAATG AGATGACAGA GGGGGAGTTT
ATCGCCGCCG TTGCCGACAA AGCAGACTGT TACCTGTTGC TGGATATTAA CAATGCCTAT
GTGACAGCTA AGAATCTGGA TCAGGAGATG CAGACATTTA TGGATGTGAT CCCAGTGGAG
CGGGTTAAGC AGATACATTT AGCCGGATTC CATGAGAAAG AAGACTTCCT GCTTGATGCT
CATAACCATG CTGTGGATCA AAAGGTGTGG CAGGCATTTG AGCAGTTTAT CGAAAAAAAT
GGTGCCATCC CTAGTATGAT TGAGTGGGAT AACGATCTTC CTCCTTTGGC CCGTCTACTA
CAAGAGAGGG AGATTGCCGC TAGCATTCTC GCATCAGCTA AACCTGTGAC TCAAGCCGCT
GCAGCTTTTA GGGGAAGTTA TGCGTTTAGC TGA
 
Protein sequence
MSDNHLVGAG IGLRLPHVQE ILAAGQTGIP WFEVLVDNWL VEGGLNKRML QEVCERYPIV 
LHSVGLSLGG LSPLDLDYLK QVKALKRETG AIWYSEHASF SGNNDFKVPD LLPLPYTEEA
VDHLSQRIMQ VQEFMGERIL LENVSTYLSC QFNEMTEGEF IAAVADKADC YLLLDINNAY
VTAKNLDQEM QTFMDVIPVE RVKQIHLAGF HEKEDFLLDA HNHAVDQKVW QAFEQFIEKN
GAIPSMIEWD NDLPPLARLL QEREIAASIL ASAKPVTQAA AAFRGSYAFS