Gene Swoo_4771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4771 
Symbol 
ID6119148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5761792 
End bp5762541 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content48% 
IMG OID641636352 
Producthypothetical protein 
Protein accessionYP_001763115 
Protein GI170729089 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000131093 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATTAAAA TCACCTCTCT GGCTTTAGTG ATCACGGCAA CCGTGGCACT TACAGCATGT 
AACCCAAACG AACAAACCTC CACCAAGGCT GATATAGAGC AAGCACCTTC AGCCGTTTCA
ATGGCAAATC CAGCTTCTGA GTACTGTGTT TCACTGGGTG GGAAACTAGA GATTAACAAT
GAAGCTGAAG GACAAGTTGG GATCTGCCAC CTTCCTAGCG GTGAGAAGAT AGAGGAGTGG
ACCCTCTACC GAAAAGCCAA TAAACAAGAG GTTACAACCG CCATTGATAT GGCCAATCCA
GCCTCTACAT ATTGTGAGTC TCTACAGGGT AAACTTGCAC TAGATACCGG TGTCTGTACC
CTACCAAGCG GTGAAGCGTT AGATCAGTGG GATCTGTTCA GGCGCGATCA TAAGCAGACA
AAACCTGCTA TGGGCATGGC CAATCCAGCC TCTACATATT GTGAGTCTCT GCAGGGTAAG
CTTGCACTAG ATACTGGTGT CTGTACTTTG CCGAGCGGTG AAGCGTTAGA TCAGTGGGAT
CTGTTCAGGC GCGATCATAA GCAGACTAAG CCCGCTATCG GTATGGCTAA CCCAGCTGCT
AAGTATTGTG GGTCTCTGCA GGGTAAGCTG GCACTGGAAA CCGGTGTCTG TACTTTACCA
AGCGGTGAAG CGTTAGATCA GTGGGATCTG TTCAGACGCG ATCATAAACA AACTGATCCC
GTTAAAGAGC TGCTACCGAT AACTCAATGA
 
Protein sequence
MIKITSLALV ITATVALTAC NPNEQTSTKA DIEQAPSAVS MANPASEYCV SLGGKLEINN 
EAEGQVGICH LPSGEKIEEW TLYRKANKQE VTTAIDMANP ASTYCESLQG KLALDTGVCT
LPSGEALDQW DLFRRDHKQT KPAMGMANPA STYCESLQGK LALDTGVCTL PSGEALDQWD
LFRRDHKQTK PAIGMANPAA KYCGSLQGKL ALETGVCTLP SGEALDQWDL FRRDHKQTDP
VKELLPITQ