Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4771 |
Symbol | |
ID | 6119148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5761792 |
End bp | 5762541 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641636352 |
Product | hypothetical protein |
Protein accession | YP_001763115 |
Protein GI | 170729089 |
COG category | [R] General function prediction only |
COG ID | [COG3042] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000131093 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATTAAAA TCACCTCTCT GGCTTTAGTG ATCACGGCAA CCGTGGCACT TACAGCATGT AACCCAAACG AACAAACCTC CACCAAGGCT GATATAGAGC AAGCACCTTC AGCCGTTTCA ATGGCAAATC CAGCTTCTGA GTACTGTGTT TCACTGGGTG GGAAACTAGA GATTAACAAT GAAGCTGAAG GACAAGTTGG GATCTGCCAC CTTCCTAGCG GTGAGAAGAT AGAGGAGTGG ACCCTCTACC GAAAAGCCAA TAAACAAGAG GTTACAACCG CCATTGATAT GGCCAATCCA GCCTCTACAT ATTGTGAGTC TCTACAGGGT AAACTTGCAC TAGATACCGG TGTCTGTACC CTACCAAGCG GTGAAGCGTT AGATCAGTGG GATCTGTTCA GGCGCGATCA TAAGCAGACA AAACCTGCTA TGGGCATGGC CAATCCAGCC TCTACATATT GTGAGTCTCT GCAGGGTAAG CTTGCACTAG ATACTGGTGT CTGTACTTTG CCGAGCGGTG AAGCGTTAGA TCAGTGGGAT CTGTTCAGGC GCGATCATAA GCAGACTAAG CCCGCTATCG GTATGGCTAA CCCAGCTGCT AAGTATTGTG GGTCTCTGCA GGGTAAGCTG GCACTGGAAA CCGGTGTCTG TACTTTACCA AGCGGTGAAG CGTTAGATCA GTGGGATCTG TTCAGACGCG ATCATAAACA AACTGATCCC GTTAAAGAGC TGCTACCGAT AACTCAATGA
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Protein sequence | MIKITSLALV ITATVALTAC NPNEQTSTKA DIEQAPSAVS MANPASEYCV SLGGKLEINN EAEGQVGICH LPSGEKIEEW TLYRKANKQE VTTAIDMANP ASTYCESLQG KLALDTGVCT LPSGEALDQW DLFRRDHKQT KPAMGMANPA STYCESLQGK LALDTGVCTL PSGEALDQWD LFRRDHKQTK PAIGMANPAA KYCGSLQGKL ALETGVCTLP SGEALDQWDL FRRDHKQTDP VKELLPITQ
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