Gene Swoo_4747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4747 
Symbol 
ID6119124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5727620 
End bp5728525 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content40% 
IMG OID641636328 
Productmethionine sulfoxide reductase A 
Protein accessionYP_001763091 
Protein GI170729065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.246978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0101893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTG GTAGAACAAT TAGAATATAT CTAGATGATG GTTCGATTTC CGGGATCAGG 
CATGCTGAAA TTGTTAACTG GACTGGACAA GCAATATCTG CACCTCGAAC TCAGGTGAAG
TCTTTGTCTG ACTGGGAAGA GTCAAAAAAG CCGGGTGTAT ATTTTCTTTT TGGAGTGGAT
GAAACTTCTG GAAACTCAGC TGTTTATATT GGGGAAGCAG AGAATGTTCT GGATCGTTTA
CAAAGCCATG TTGCTACCAA AGACTTCTGG AATGAAGTAG TTTTGTTCAC AAATAAAGAT
GAAAATCTAA CTAAATCTCA TGTCAAATAC CTTGAATCTA GACTAGTGCA ATTTGCTAAA
TCAGCAGAGA GATACGTTGT TCTAAATGGT AATGAACCTC AACAGCCTGT ATTACCACGA
GGTGATCGTG ATGCCATGGA AGAGTTCCTA TCAAATATCA GGGTACTTTT AGGTGTTATT
GGTCACAAAG CACTAGAGTC ATTAGCTCAA CATGAGGTAC CTAAGTCGCT TGAAAATCAA
GCGCATGAAG AAAGTGCTCT TGCTTCAAAT AACAGCAATT TTAGCTTAAA GGTTAAGGGA
ATATCCGCAA AGGCAGTGTT AACTGATGAG GGTATCGTAG TGTTATCCGG TTCAATGGTA
GCTGATAAAA TTAGGGATAG TCTTTCAACA GGCTATCAAA AACTTCGTGC AGAATTAATT
GATTCAGGTG CAGTGGTAAA AGGTAGTGAC GGTATTCTTC GGTTTACCAG AGATCGTCTT
TTCACTAGCC CATCACAGGC TGCTGCAATA ATAGCTGGCT ATGCGATTAA TGGGCGTCAT
CATTGGCAGA CTGAGAGTGG AAAAACACTA AAAGCAGTTG AAGAGTCAGA GGCTACCAGC
ATTTAA
 
Protein sequence
MSIGRTIRIY LDDGSISGIR HAEIVNWTGQ AISAPRTQVK SLSDWEESKK PGVYFLFGVD 
ETSGNSAVYI GEAENVLDRL QSHVATKDFW NEVVLFTNKD ENLTKSHVKY LESRLVQFAK
SAERYVVLNG NEPQQPVLPR GDRDAMEEFL SNIRVLLGVI GHKALESLAQ HEVPKSLENQ
AHEESALASN NSNFSLKVKG ISAKAVLTDE GIVVLSGSMV ADKIRDSLST GYQKLRAELI
DSGAVVKGSD GILRFTRDRL FTSPSQAAAI IAGYAINGRH HWQTESGKTL KAVEESEATS
I