Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4742 |
Symbol | |
ID | 6119119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5723385 |
End bp | 5725301 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641636324 |
Product | hypothetical protein |
Protein accession | YP_001763087 |
Protein GI | 170729061 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.681757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAT TATTGTCTTT AACTGTTTTA CTCATTTTCA TGGCCCTTTT AGGGGGCTGT CATGATTCAA AGCAGCTTGA ACCAGCACCA TCTACCCCCA CGCAGCCTCC TGCAAACCCA GCTAGTGAAG TGACCTCACT ATCTGTGCTC ATCATAGATC AGAACTATCG AGCCTTAGAG GCGGTGAAGT TGACCTTAAG TAGCCAAGAT TTTGTTTTGG AGGTGGAGAC TGATAGCGAA GGGAGAGCTC ATTTTGAGGT CGATTATGGC AAGCTAAACT TTCCGCTTAT CTTATCCAGT AAAAAGCTGG GGTATAGCAA TCAGGTTAAG GTGATTCAAG ACCTTGCAGA GAAAGGAGAG AATCAATTTC AGCTACCAGT TTTGCAGCGT CAATTACCTA TAGTAATTGA AGCTGAGGGG GAAGCTGAGC TTTTTACGAC CGATGGGGCT TATCTTATGT TGCCTGCAAA CGGGCTTGTT GATGGGGATG GAAATAGAGT GAGTGGGGAA GTTTATGTCA CCATTACCCC ATTGAATACT GCCAACCCCG ATGGATTAAA GCTGTTTCCC GGTAACTTTG AGGGGCTATA TCCAGGGCTT GATGAAACGA GTCCAATTGC CACTTATGGG ACGACTGAGT TTCACTTTGA GCAGGGGGGA GATAAGTTGA ATCTAGCTCC CGGAGTTGAG GCGGTTATTG AGCTGCCCAT CTATGTCGCT CAGCATGTCG ATGGCAGCGC AGTTGTAACT GGAGACAGGA TCGAGTTATG GCATTTAGAG GAAGATAGCG GTCTCTGGCA GAACTACGGG TATGGTGAGG TGGTGGATTC GAAAAGATCA CCAACTGGTT TCGCTTTACG GGCGAGTGTC CCTCACTTTA GCTGGTGGAA TGTCGATGTC GCTCCGGAGA CCAGAGTTAT TAATCTTACT GTCACAGGTG AGGTGAGTGG CGAATGTAAA GTTGGACTTA ATGCAGATAT GGCTTCAAAT TCAAGGCCGG GGTTGAGAGC TTCCACTCAG GTATCAATTC CGAGTAATTC AAGCAGGCGG CTGTTAATTC CGAGTGGGAG ACAGGTTAAC TTTAGTGCTG TACTCAATGC CAATGGTCAG GTTTATCTTG GTGAGCTTCA AGTGGCCGCC AATAATACCG ATGATGATTT TACCATAGAG GTGGTGGCTG AAGGAGGAGT TAACCCTGAA GACCCAGCTC CCTATATTGC AAAGATCTTT GCGAAAACTA CCCCTGAGTT TGAATACGAC TTAATCACAA AAACACATAG GCATACGGCT AATATTATTC ATTATTACTG GGATGCTAAG ACAGGCCATC CGAGACAAGA TGGATGCAGT GAAGATAGGA TGCCTGATGG TGATCCTAAA TTAGATATCC ATTTGATGTC TGATGCGAGG TTGTATGAAG ATGTTGAGTT GGGCAATGAG GCTGGTCAAA TAGATCTCGC GGTATCTCCT TTTGATGTAG TGACGCAGGG GGAGACTCTG CCCGCCGATC CTGAGTTTAT CTCATTAAAC CTGCTTGCTA GCAATACTTT TGGGAGTGCT AGCCGAGTGA TTGAGGTACC AAACCCAAGA GGCGCTGCCC CCAAATTAAA AGGGATCAGA AGTTACTCTC ATGATAAGTA CCAAACCTTG GATGTTAGAT GGAGTGTGGA AGGGGCTGAT TCTGGTCATA TTGAAGTTTG GCCTTTAAAT GATCAAGCTG GCCCTGCTCT AATTGTTGAG GAGATTGACC CTTTTGCTAA ACATGCTCAA TTAGCGCTTG AAGGTTTACC AATAGAGGGT TTAAGTATTA AAGTAACTTA TGAAAATCAG TATGATAAGC TAGAGGTTCC TATTGTTATT AGTGGTGAGG CTTGTGATCT TATGTCTGAT CTTCCCTGTG ACCAACCGAC AAATTAG
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Protein sequence | MKGLLSLTVL LIFMALLGGC HDSKQLEPAP STPTQPPANP ASEVTSLSVL IIDQNYRALE AVKLTLSSQD FVLEVETDSE GRAHFEVDYG KLNFPLILSS KKLGYSNQVK VIQDLAEKGE NQFQLPVLQR QLPIVIEAEG EAELFTTDGA YLMLPANGLV DGDGNRVSGE VYVTITPLNT ANPDGLKLFP GNFEGLYPGL DETSPIATYG TTEFHFEQGG DKLNLAPGVE AVIELPIYVA QHVDGSAVVT GDRIELWHLE EDSGLWQNYG YGEVVDSKRS PTGFALRASV PHFSWWNVDV APETRVINLT VTGEVSGECK VGLNADMASN SRPGLRASTQ VSIPSNSSRR LLIPSGRQVN FSAVLNANGQ VYLGELQVAA NNTDDDFTIE VVAEGGVNPE DPAPYIAKIF AKTTPEFEYD LITKTHRHTA NIIHYYWDAK TGHPRQDGCS EDRMPDGDPK LDIHLMSDAR LYEDVELGNE AGQIDLAVSP FDVVTQGETL PADPEFISLN LLASNTFGSA SRVIEVPNPR GAAPKLKGIR SYSHDKYQTL DVRWSVEGAD SGHIEVWPLN DQAGPALIVE EIDPFAKHAQ LALEGLPIEG LSIKVTYENQ YDKLEVPIVI SGEACDLMSD LPCDQPTN
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