| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4738 |
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| Symbol | |
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| ID | 6119115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5717175 |
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| End bp | 5718920 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641636320 |
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| Product | YidE/YbjL duplication |
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| Protein accession | YP_001763083 |
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| Protein GI | 170729057 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTT CAGAATTGTT TAGTTTTATC TTTGGTTATA TTGCTCACAA CCCCTTCGTA
TTTCTCTTCC TGAGTATCGC TATCGGTTAT CCCCTAGGGA AGATCTCCAT TAAGGGGATC
AACCTAGGCT CGACCGCGGG CACACTCGTA GTGGGAGTTG GTATCGCGCT CACGGCATTC
TCAGTTTATG GTTTGAGGAT CGATGCGCCG GGACTAGTTT CCGATATCTT CTTGATGATG
TTTATGTACG CCATCGGAAT GAAGGTTGGG CCGCAGTTTT TCTCTGGATT AGCGCGGGGA
GGCTTAGATT TTGTGGTTAT CGGTCTTATC GTGGTGTTCA GTAATTTTCT TATTGTCTTC
TTCGGAGCCA AATTATTGGG ATTAGCGCCT GGCTATGCAG CGGGGATCAT ATCAGGTAGT
TATACCGTAA CTGCTGTGAT GGGAGTGGCT CAGTCTGCTA TTACGTCCGG GGCATTTAAA
GCACCTGCAG GCATGACACT CGATCAGGTC AGTGCCAATA TCGCTGCGGG TTATGCCATT
AGTTATATCC TTTCAAGCGT ATTTATTATT TTACTTATCA AGTATCTGCC TGCCATGTTC
GGAATCGATC CCGTTAAAGC TGGTAAGGAT GCTGAAGCTG AGTTTGGGGC TGGCGGAGAC
ACAGAGGCGC TGCCTAGCAC TAACGGTTTT TCTAACCTGG GTGTGTTGCC TTTAGATATT
CGTGCCTATC GAGTTGAGCA CCAAGAGCTT GTGGGGCAAA GTGTTGAAAG CCTGTTTCAT
CAATACCCTC ATGCGGCAAT CCTTAAACTG GTTCGTGGTG ATGAGGTGAT TGATGCAGCC
GATAATCCTA AGCTTGAGCT AGGCGATATT ATCGGGATTC GAGGTGATTA CCATGAGCTG
ATTCAAGGTG GCGAGTCGAG AGTGGGTGTC GAGGTCGATG AGCCGCGTGC GCGCAATGTC
GATATTGAAG TGGCAGATAT TCACTTAGGT AAGTCGGCAT TTATTGGAAA AACCATCGAA
GAGATTAGTA AAGAGGTCGG ATTTGGTATC TATCTCAAGG CGCTGTTCAG GCAAGGGCAT
CAGCTCCCTG TTTTACCGCA ATCTGTGGTT GAGATGGGAG ATGTGATCCG AGTGGCGGGG
TCTGACTGGT GTGTTCAACA AGCGGCGAAG AGGTTAAATA GCAATCCCAT TGTTGAAAGC
ACACTCACAG AGACCTTCTA TCTCGCGCTC TCTTTACTGA TTGGTTATGT CTGCGGCCAC
ATGAGTGTGA CTTTGGGGGG AATTCCATTT GCGCTCGGTA CTTCGGCTGG CTGTATGCTT
ACTGGTATCG TGTTCTCCTT CCTGCGTACA CGTAACCCTG CATTTGGCGG CCCGATGAGT
GAGGGAGCTC GTAGTTTCTT GCAAGATATC GGCCTGAGCT TGTTTGTCGC GGTATTAGCG
GCAACGGTTG GACCAAAGAT ATTGGCATCA TTCCAAGGTA TTGTGGTGAT TAAGATAGCC
GCACTGGGCT TAACGGCGGC ATTGGTGCCT CCTCTGCTTG CTTGGATATA TGGTCTCTAC
TTCCGCAAAA TGAATCCTGC AATATTGGCG GGAGCCTGTG CTGGCGGACG TAACAGTACT
CCTGCGATGA AGGGGGCTCA GGACGCATGT CAAAGTGATA TGCCTGCGGT TGGTTATCCG
GTGCCTTATG CCTTAACCTC AATGATCGTA CTGGTTCTGG GTTACCTGAC TATGGTGCTT
TATTAA
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| Protein sequence | MNISELFSFI FGYIAHNPFV FLFLSIAIGY PLGKISIKGI NLGSTAGTLV VGVGIALTAF
SVYGLRIDAP GLVSDIFLMM FMYAIGMKVG PQFFSGLARG GLDFVVIGLI VVFSNFLIVF
FGAKLLGLAP GYAAGIISGS YTVTAVMGVA QSAITSGAFK APAGMTLDQV SANIAAGYAI
SYILSSVFII LLIKYLPAMF GIDPVKAGKD AEAEFGAGGD TEALPSTNGF SNLGVLPLDI
RAYRVEHQEL VGQSVESLFH QYPHAAILKL VRGDEVIDAA DNPKLELGDI IGIRGDYHEL
IQGGESRVGV EVDEPRARNV DIEVADIHLG KSAFIGKTIE EISKEVGFGI YLKALFRQGH
QLPVLPQSVV EMGDVIRVAG SDWCVQQAAK RLNSNPIVES TLTETFYLAL SLLIGYVCGH
MSVTLGGIPF ALGTSAGCML TGIVFSFLRT RNPAFGGPMS EGARSFLQDI GLSLFVAVLA
ATVGPKILAS FQGIVVIKIA ALGLTAALVP PLLAWIYGLY FRKMNPAILA GACAGGRNST
PAMKGAQDAC QSDMPAVGYP VPYALTSMIV LVLGYLTMVL Y
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