Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4738 |
Symbol | |
ID | 6119115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5717175 |
End bp | 5718920 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641636320 |
Product | YidE/YbjL duplication |
Protein accession | YP_001763083 |
Protein GI | 170729057 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTT CAGAATTGTT TAGTTTTATC TTTGGTTATA TTGCTCACAA CCCCTTCGTA TTTCTCTTCC TGAGTATCGC TATCGGTTAT CCCCTAGGGA AGATCTCCAT TAAGGGGATC AACCTAGGCT CGACCGCGGG CACACTCGTA GTGGGAGTTG GTATCGCGCT CACGGCATTC TCAGTTTATG GTTTGAGGAT CGATGCGCCG GGACTAGTTT CCGATATCTT CTTGATGATG TTTATGTACG CCATCGGAAT GAAGGTTGGG CCGCAGTTTT TCTCTGGATT AGCGCGGGGA GGCTTAGATT TTGTGGTTAT CGGTCTTATC GTGGTGTTCA GTAATTTTCT TATTGTCTTC TTCGGAGCCA AATTATTGGG ATTAGCGCCT GGCTATGCAG CGGGGATCAT ATCAGGTAGT TATACCGTAA CTGCTGTGAT GGGAGTGGCT CAGTCTGCTA TTACGTCCGG GGCATTTAAA GCACCTGCAG GCATGACACT CGATCAGGTC AGTGCCAATA TCGCTGCGGG TTATGCCATT AGTTATATCC TTTCAAGCGT ATTTATTATT TTACTTATCA AGTATCTGCC TGCCATGTTC GGAATCGATC CCGTTAAAGC TGGTAAGGAT GCTGAAGCTG AGTTTGGGGC TGGCGGAGAC ACAGAGGCGC TGCCTAGCAC TAACGGTTTT TCTAACCTGG GTGTGTTGCC TTTAGATATT CGTGCCTATC GAGTTGAGCA CCAAGAGCTT GTGGGGCAAA GTGTTGAAAG CCTGTTTCAT CAATACCCTC ATGCGGCAAT CCTTAAACTG GTTCGTGGTG ATGAGGTGAT TGATGCAGCC GATAATCCTA AGCTTGAGCT AGGCGATATT ATCGGGATTC GAGGTGATTA CCATGAGCTG ATTCAAGGTG GCGAGTCGAG AGTGGGTGTC GAGGTCGATG AGCCGCGTGC GCGCAATGTC GATATTGAAG TGGCAGATAT TCACTTAGGT AAGTCGGCAT TTATTGGAAA AACCATCGAA GAGATTAGTA AAGAGGTCGG ATTTGGTATC TATCTCAAGG CGCTGTTCAG GCAAGGGCAT CAGCTCCCTG TTTTACCGCA ATCTGTGGTT GAGATGGGAG ATGTGATCCG AGTGGCGGGG TCTGACTGGT GTGTTCAACA AGCGGCGAAG AGGTTAAATA GCAATCCCAT TGTTGAAAGC ACACTCACAG AGACCTTCTA TCTCGCGCTC TCTTTACTGA TTGGTTATGT CTGCGGCCAC ATGAGTGTGA CTTTGGGGGG AATTCCATTT GCGCTCGGTA CTTCGGCTGG CTGTATGCTT ACTGGTATCG TGTTCTCCTT CCTGCGTACA CGTAACCCTG CATTTGGCGG CCCGATGAGT GAGGGAGCTC GTAGTTTCTT GCAAGATATC GGCCTGAGCT TGTTTGTCGC GGTATTAGCG GCAACGGTTG GACCAAAGAT ATTGGCATCA TTCCAAGGTA TTGTGGTGAT TAAGATAGCC GCACTGGGCT TAACGGCGGC ATTGGTGCCT CCTCTGCTTG CTTGGATATA TGGTCTCTAC TTCCGCAAAA TGAATCCTGC AATATTGGCG GGAGCCTGTG CTGGCGGACG TAACAGTACT CCTGCGATGA AGGGGGCTCA GGACGCATGT CAAAGTGATA TGCCTGCGGT TGGTTATCCG GTGCCTTATG CCTTAACCTC AATGATCGTA CTGGTTCTGG GTTACCTGAC TATGGTGCTT TATTAA
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Protein sequence | MNISELFSFI FGYIAHNPFV FLFLSIAIGY PLGKISIKGI NLGSTAGTLV VGVGIALTAF SVYGLRIDAP GLVSDIFLMM FMYAIGMKVG PQFFSGLARG GLDFVVIGLI VVFSNFLIVF FGAKLLGLAP GYAAGIISGS YTVTAVMGVA QSAITSGAFK APAGMTLDQV SANIAAGYAI SYILSSVFII LLIKYLPAMF GIDPVKAGKD AEAEFGAGGD TEALPSTNGF SNLGVLPLDI RAYRVEHQEL VGQSVESLFH QYPHAAILKL VRGDEVIDAA DNPKLELGDI IGIRGDYHEL IQGGESRVGV EVDEPRARNV DIEVADIHLG KSAFIGKTIE EISKEVGFGI YLKALFRQGH QLPVLPQSVV EMGDVIRVAG SDWCVQQAAK RLNSNPIVES TLTETFYLAL SLLIGYVCGH MSVTLGGIPF ALGTSAGCML TGIVFSFLRT RNPAFGGPMS EGARSFLQDI GLSLFVAVLA ATVGPKILAS FQGIVVIKIA ALGLTAALVP PLLAWIYGLY FRKMNPAILA GACAGGRNST PAMKGAQDAC QSDMPAVGYP VPYALTSMIV LVLGYLTMVL Y
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