| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4735 |
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| Symbol | |
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| ID | 6119112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5714253 |
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| End bp | 5715158 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636317 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_001763080 |
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| Protein GI | 170729054 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000515077 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTTAT TAGATAAAGT TATAAGCAAG GCGGCGGACA TCCCGCATAA GCCTCTGAGC
ACAAGCGTTT TTTGGGTCGG TTTAATTATT GTACTCTACC TGTTTGCTCA AATTACATGG
AAGTTAGTTC CTACCTCCGA GCCAACCACA AACTGGCGTC CTACCCCTGC AAGTGTCAGT
GCGGGTAAGA GTGTCAGTGT TGCTCAACTG CAGGCACTGT CTCTGTTTGG CAAGGCCGAT
GAAGCCTCTA GTCAACCTAA AGTTGCACCT GTAGAGGAGC AGATCACCGA TGCGCCTAAG
ACCTCACTGT CGATTCAATT GACGGGTGTT GTGGCGTCGA CTGCACAGCA AAAAGGCTTA
GCAGTTATCG CATCGAGTGG TAGTCAAAAT ACCTATAGCT TAGGCGATAA GATTAAGGGT
ACCTCCGCAT CACTCAAAGA GGTGTACGCA GATCGCATCA TAATAACCAA CAGTGGTCGG
TATGAAACCT TGATGTTAGA CGGTCTTAAA TATGAGACTA ACGGTCAAGC TAACAAACAA
CTTCAGCAAG CCAAGTCTGT GCGCAAAGTT GATCAGCGCC AAAATAGACA AGTTGCCCAA
GATATCTTGG AGTCCAGAGA TGAACTCCTT GCCGATCCGA GTAAGCTGAC AGATTACTTA
GCTATCTCCC CGGTACAGAG GGAAGGTCAG CTTCAGGGTT ACCGCTTAAA TGCAGGAAAA
GACAGAGATC TGTTTAAACA AGCGGGTTTT AGAGCTAATG ATCTGGCAAA GTCGATCAAT
GGTTATGATC TTACTGAGAT GACTCAGGCA TTAGAGGTGA TGGCACAGTT GCCAGAGCTT
ACCGAGATAT CTTTGATGGT GGAGCGTGAC GGGCAGCTGG TCGAGATAAT GTTCAGTCTC
CCTTAG
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| Protein sequence | MDLLDKVISK AADIPHKPLS TSVFWVGLII VLYLFAQITW KLVPTSEPTT NWRPTPASVS
AGKSVSVAQL QALSLFGKAD EASSQPKVAP VEEQITDAPK TSLSIQLTGV VASTAQQKGL
AVIASSGSQN TYSLGDKIKG TSASLKEVYA DRIIITNSGR YETLMLDGLK YETNGQANKQ
LQQAKSVRKV DQRQNRQVAQ DILESRDELL ADPSKLTDYL AISPVQREGQ LQGYRLNAGK
DRDLFKQAGF RANDLAKSIN GYDLTEMTQA LEVMAQLPEL TEISLMVERD GQLVEIMFSL
P
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