Gene Swoo_4721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4721 
Symbol 
ID6119098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5699523 
End bp5700488 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content38% 
IMG OID641636303 
Productfatty acid desaturase 
Protein accessionYP_001763066 
Protein GI170729040 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATA CGGATAGAGT TTATTCAAAT GATAAACATA GTGCTTTTAG TGGCACTGTA 
AAATGGAAGC CTGTTAAATC TATTTGGTTT TTGACTCATC TCTTAGCAAC TATTTTAATT
GCTCCATTTG TTTTGTCTTT TTCCGCCTTT TTTGTCTTTT TAATCCTTAC AGCTATTACA
TTATGTTTTG GGCATTCGCT AGGAATGCAT AGATTGCTAA TTCATCGCTC ATATGAATGT
CCTAAATGGA TGGAGTATTT GTTTGTATAT TTGGGTGTGT TAGTTGGAAT GGCAGGCCCA
ATAGGCATGA TGATTCAACA TGACCTTCGT GATTGGGCGC AAAGACAAAC TCAGTGTCAT
GATTACTTAT TACATGGCTC AAAAATACTA AAGGATGGTT GGTGGCAATT AAATTGTGAT
CTTGTACTAA ACAACCCTCC CGAATTTAAT ATAGAAGAAT CGGTATCCTT AAATAAGTTT
TATCAATTCA TAGAAAAAAC GTGGATGCTT CAACAATTAG TCCTAGCCAT TCCTTTATTT
CTTATTGGTG GTATACCTTG GTTAGTTTGG GGCGTTTCTG TTCGAATTGT AATATCTGTC
GGTGGTCATT GGCTCATTGG TTACTTTGCC CATAATAAAG GCGATAAAAC TTGGGAAGTT
GAAGGAGCTG CGGTACAAGG CCACAATATT AAAGTAGCGG GTTTCCTTTC AATGGGAGAA
GCGTGGCATA ACAATCATCA TGCTTATCCG GGTTCCGCAA TGTTAGGCTT GTACAGTGAC
GAACCAGATC CAGGGTGGTG GGTTCTAAAC GCTTTACATA ATCTAAGAAT CGTTAAAAAC
ATTAAATTGC CAAAGCAGCT ACCAGCTAGG TCAGAATTAG TCAAAGTTTC TGATAATATT
GACAGTCGAG TTGAACGAGT GCCTGAGGAC TGCGAAGTCG CAAAGTTTAT ACGAAAAGGC
AGCTAA
 
Protein sequence
MLNTDRVYSN DKHSAFSGTV KWKPVKSIWF LTHLLATILI APFVLSFSAF FVFLILTAIT 
LCFGHSLGMH RLLIHRSYEC PKWMEYLFVY LGVLVGMAGP IGMMIQHDLR DWAQRQTQCH
DYLLHGSKIL KDGWWQLNCD LVLNNPPEFN IEESVSLNKF YQFIEKTWML QQLVLAIPLF
LIGGIPWLVW GVSVRIVISV GGHWLIGYFA HNKGDKTWEV EGAAVQGHNI KVAGFLSMGE
AWHNNHHAYP GSAMLGLYSD EPDPGWWVLN ALHNLRIVKN IKLPKQLPAR SELVKVSDNI
DSRVERVPED CEVAKFIRKG S