Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4721 |
Symbol | |
ID | 6119098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5699523 |
End bp | 5700488 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641636303 |
Product | fatty acid desaturase |
Protein accession | YP_001763066 |
Protein GI | 170729040 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAATA CGGATAGAGT TTATTCAAAT GATAAACATA GTGCTTTTAG TGGCACTGTA AAATGGAAGC CTGTTAAATC TATTTGGTTT TTGACTCATC TCTTAGCAAC TATTTTAATT GCTCCATTTG TTTTGTCTTT TTCCGCCTTT TTTGTCTTTT TAATCCTTAC AGCTATTACA TTATGTTTTG GGCATTCGCT AGGAATGCAT AGATTGCTAA TTCATCGCTC ATATGAATGT CCTAAATGGA TGGAGTATTT GTTTGTATAT TTGGGTGTGT TAGTTGGAAT GGCAGGCCCA ATAGGCATGA TGATTCAACA TGACCTTCGT GATTGGGCGC AAAGACAAAC TCAGTGTCAT GATTACTTAT TACATGGCTC AAAAATACTA AAGGATGGTT GGTGGCAATT AAATTGTGAT CTTGTACTAA ACAACCCTCC CGAATTTAAT ATAGAAGAAT CGGTATCCTT AAATAAGTTT TATCAATTCA TAGAAAAAAC GTGGATGCTT CAACAATTAG TCCTAGCCAT TCCTTTATTT CTTATTGGTG GTATACCTTG GTTAGTTTGG GGCGTTTCTG TTCGAATTGT AATATCTGTC GGTGGTCATT GGCTCATTGG TTACTTTGCC CATAATAAAG GCGATAAAAC TTGGGAAGTT GAAGGAGCTG CGGTACAAGG CCACAATATT AAAGTAGCGG GTTTCCTTTC AATGGGAGAA GCGTGGCATA ACAATCATCA TGCTTATCCG GGTTCCGCAA TGTTAGGCTT GTACAGTGAC GAACCAGATC CAGGGTGGTG GGTTCTAAAC GCTTTACATA ATCTAAGAAT CGTTAAAAAC ATTAAATTGC CAAAGCAGCT ACCAGCTAGG TCAGAATTAG TCAAAGTTTC TGATAATATT GACAGTCGAG TTGAACGAGT GCCTGAGGAC TGCGAAGTCG CAAAGTTTAT ACGAAAAGGC AGCTAA
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Protein sequence | MLNTDRVYSN DKHSAFSGTV KWKPVKSIWF LTHLLATILI APFVLSFSAF FVFLILTAIT LCFGHSLGMH RLLIHRSYEC PKWMEYLFVY LGVLVGMAGP IGMMIQHDLR DWAQRQTQCH DYLLHGSKIL KDGWWQLNCD LVLNNPPEFN IEESVSLNKF YQFIEKTWML QQLVLAIPLF LIGGIPWLVW GVSVRIVISV GGHWLIGYFA HNKGDKTWEV EGAAVQGHNI KVAGFLSMGE AWHNNHHAYP GSAMLGLYSD EPDPGWWVLN ALHNLRIVKN IKLPKQLPAR SELVKVSDNI DSRVERVPED CEVAKFIRKG S
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