| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4719 |
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| Symbol | |
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| ID | 6119096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5696319 |
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| End bp | 5696984 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636301 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001763064 |
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| Protein GI | 170729038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTCCCT GGAATGAGAT AGATACAGTC TTACTCGATA TGGACGGCAC CCTACTCGAC
CTTCATTTCG ATAACCACTT CTGGTTAAAC CTGGTACCGC AAGAGCTCAG CCGACAAAGG
GGTATCGATA CTGAAGAAGC CATCAAGCTA GTTGAAGCCG CCTACGAAAA AGTATTTGGC
ACCTTGGAGT GGTATTGCCT CGATTACTGG CAGAATGAGT TACAGCTAGA TATCTTAAAT
CTGCATAAAA CCTTAGTAGA CAGAATCCAG TTAAGACAGG ACAGCATGCC CTTTCTTAAG
GCCCTTGGCG CAGAGAATAA ATCCCGCATC TTAGTCACCA ATGCCCATCC CAACAGCCTA
GCCTTAAAGC TCGAACATAC AGATCTAGCA CTTGGGCTAG ATCAGATGCT TTCAAGCCAT
GAAACCGGGT ACCCCAAGGA GCATCCGTAC TTCTGGCAGC ATCTCTTTAT GCAATTCTCC
TTGGACCCAT CACGTTGCCT GTTTATCGAC GACAGCGAAG TGATTTTACA AGCGTCCAGA
GATGCAGGTG TTGGCCATCA ACTCGGGATC ACTAACCCAG ACAGCCAGAA ACCCCATAAA
GTATTTAGCG ACTTTCCCGC TATTGGGGAT TATCACCTTC TGCTCGATGA CCTGTTAGCA
AAATAA
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| Protein sequence | MFPWNEIDTV LLDMDGTLLD LHFDNHFWLN LVPQELSRQR GIDTEEAIKL VEAAYEKVFG
TLEWYCLDYW QNELQLDILN LHKTLVDRIQ LRQDSMPFLK ALGAENKSRI LVTNAHPNSL
ALKLEHTDLA LGLDQMLSSH ETGYPKEHPY FWQHLFMQFS LDPSRCLFID DSEVILQASR
DAGVGHQLGI TNPDSQKPHK VFSDFPAIGD YHLLLDDLLA K
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