| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4718 |
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| Symbol | nudE |
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| ID | 6119095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5695599 |
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| End bp | 5696144 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636300 |
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| Product | ADP-ribose diphosphatase NudE |
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| Protein accession | YP_001763063 |
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| Protein GI | 170729037 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAACA AGAAGCCAGA GATTTTAGGC GCAGAGATTG TTGCCCAGAG TCGTTTGTTT
AAAATTGAGC AGGTGCACCT GAAGTTTTCT AATCAGGTTG AGCGCCATTA TGAGAGAATG
AAGGGCAATA ATCGTGGCGC TGTGATGGTC GTCCCTGTGT TGAATCGCGA CACTTTATTG
CTGGGTCGTG AATATGCCGC TGGTACTCAC TCCTACGAGC TAGGTTTCCC CAAAGGTTTG
ATTGATCCCG GTGAAGAGGC CCATGAGGCT GCTAATCGTG AGCTGCAAGA GGAGATAGGT
TACGGTTCTA AAAAGCTAAC CCACCTGATG GAACTGAGTC TAGCTCCCGG TTACTTTGCC
AGTAAGATGC AGATTTTCAT TGCTGAAGAT CTCTACGAAA GCCAACTCGA AGGGGATGAG
CCAGAGCCTA TTGAGCTAGC CCCTTGGCCG ATCGAGAAGT GGCAAAGTTT GCTAGAGAGG
GAGGATTTTT CTGAATCTCG AAGCGTAAGT GCCTTGTTTT TAGCTTTGAA ATACCTAAAA
CTGTAA
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| Protein sequence | MNNKKPEILG AEIVAQSRLF KIEQVHLKFS NQVERHYERM KGNNRGAVMV VPVLNRDTLL
LGREYAAGTH SYELGFPKGL IDPGEEAHEA ANRELQEEIG YGSKKLTHLM ELSLAPGYFA
SKMQIFIAED LYESQLEGDE PEPIELAPWP IEKWQSLLER EDFSESRSVS ALFLALKYLK
L
|
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