Gene Swoo_4715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4715 
Symbol 
ID6119092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5692974 
End bp5694263 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content44% 
IMG OID641636297 
Productmajor facilitator transporter 
Protein accessionYP_001763060 
Protein GI170729034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTTA GCAGACGTTT TTTCCCCTAT TTTGTTACTC AATGCCTAGG TGCATTAAAC 
GATAATGTGT ATAAAAACGT ACTGCTTCTG ATGGTGGCTT ATGCCAGTGT CGATCAGTTA
CCTATGTCGA TAAACTTGTT TGTTAATATC GCTGCGGCCG TGTTTATTCT TCCCTTTCTG
CTGTTTTCAG CCCATGCAGG CTCACTGGCT GATGTTAAAG ATAAAGCTTG GCTTATCAGG
CGGATTAAGC TGGTTGAACT TGTACTCATG TCGTTCGCTG CGTTAGCGAT TTTCAGTCAA
AGCTATCTCG CTATGCTGTT TTTACTCTTT CTGATGGGAA CGCAATCTGC CTATTTTGGA
CCTGTGAAGT ATGCACTTTT GCCTCAGACA TTGAAGCCGG AGGAGCTAGT TCGTGGTAAT
GCCTGGGTGG AGGTGAGTAC ATTTCTTGCC ATTTTATGTG GCACTGTTGG TGCCGGTGTT
TTGGTTTCCA GTGACCAAGG AGTCGGTATT AGTGCGGGGT TAGTTGTTCT TTTTGCAGCA
ATCGGTGTGC TTGCCAGTTG GAATATCCCC GATTTACCCG CAGATATCGA TGCGGATAAA
CAGCCTAGGA AAGGAAACTG GCAAACGCTT AAATGGGCAT TCCAGCAGCG CGATATTTGG
GCGGCTATTA CAGGTATCAG TTGGTTCTGG TTTCTTGGTG CTAGTTATCT GACTCAGTTT
CCTAATTTTA CCCGCTTGTT TCTCTTTTCC GATCCCAGTG TTGTGTCGGT ATTGCTGGCA
CTCTTCTCAG TTGGTATTGC TGCTGGCTCC TTTATCTCTG TGCGCCTTTC TAAAGGGAAA
GTTGAACTTG GCATTGTCCC ATTAGGCTTA TGTGGCCTAA CTCTGTTTGG TATCGACTTT
GTGTTGGCGA TACCTGCTGG GGTTGAGTCA CTGTATCAAG CTAGCAGTTT TGTGATGAGC
GCAGAGCATT ACCGTTTGAT GTTTGATCTC TTTATGATTG GAGTCAGTGG TGGTGTGTAT
ATCGTTCCCC TGTATAGTTT TATTCAGTCT AAAGCTAAAG CGTCTGAGCG TGCTCAGGTA
ATTGCTGCTA ATAATATTCT TAATGCACTC TTTATGATCA CATCGGCAAT ATTGGCGATA
GTCGTACTGC AGTTACTGAC GTGGGACATT CCTACTCTGT TTATGATACT TGCTAGCAGT
AATCTTTTAG TGTTGCTATT TATCTGCCTG AGAAACGAAG TGTTTCGGCA GTCTGCATGT
CACTTTTGGG TTAAAAAGCT AAAAAAATAG
 
Protein sequence
MLFSRRFFPY FVTQCLGALN DNVYKNVLLL MVAYASVDQL PMSINLFVNI AAAVFILPFL 
LFSAHAGSLA DVKDKAWLIR RIKLVELVLM SFAALAIFSQ SYLAMLFLLF LMGTQSAYFG
PVKYALLPQT LKPEELVRGN AWVEVSTFLA ILCGTVGAGV LVSSDQGVGI SAGLVVLFAA
IGVLASWNIP DLPADIDADK QPRKGNWQTL KWAFQQRDIW AAITGISWFW FLGASYLTQF
PNFTRLFLFS DPSVVSVLLA LFSVGIAAGS FISVRLSKGK VELGIVPLGL CGLTLFGIDF
VLAIPAGVES LYQASSFVMS AEHYRLMFDL FMIGVSGGVY IVPLYSFIQS KAKASERAQV
IAANNILNAL FMITSAILAI VVLQLLTWDI PTLFMILASS NLLVLLFICL RNEVFRQSAC
HFWVKKLKK