| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4714 |
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| Symbol | |
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| ID | 6119091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5691816 |
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| End bp | 5692922 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636296 |
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| Product | tRNA 2-selenouridine synthase |
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| Protein accession | YP_001763059 |
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| Protein GI | 170729033 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2603] Predicted ATPase |
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| TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.728347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGGA ACATCATCCC TAAAACGACC TATCAAGAGA TCATGCTCAG CGGACATCCG
ATGATAGACG TTAGGGCACC GATAGAGTTC GACAAGGGGG CATTCCCCTC GAGTTCGAAT
TTTCCTCTGA TGCAGGACAG TGAGCGTCAG CGTGTAGGAA CCTGTTATAA AGAGCAGGGA
CAAGATGCCG CTATCGCATT AGGCCACTCT TTAGTGAATG GGAAGGTGAA GCAGCAAAGA
GTTGATGCCT GGCTAGCGTT TATCAAACAG CACCCAGATG CATATCTCTA CTGTTTTCGT
GGCGGCTTAC GCTCTCAACT TTCGCAGCAA TGGATCAAAG AAGCTGGTGT TGATATCCCC
TATGTCGAAG GTGGCTACAA AGCCATGAGA CAGTACCTCA TTGAGGTGAT AGATAACGCA
CCAGCCAAGC AGCCAGTGTT TATCCTTAGC GGGATCACCG GCAGTGGTAA AACAGACTTC
CTCCTGCAAA GATCTGAGGC GGTCGACCTT GAAGGTTATG CACACCACAG AGGCTCAAGT
TTTGGCCGCT ACCATGAGGG GCAACCGACT CAAATTAACT TTGAAAATCA GCTTGCTGTC
GCTTTACTTA AACATCAAGA GAGAAAAGAG CAGTGTCTAC TTGTCGAAGA TGAGAGCTTT
TTGATTGGAC GTTCGGCTAT CCCTAAAGCA TTTTATGAAG GGATGCAGAA CGCCGATATT
TTAGTACTCG AGGAGCCAGA GGAGACTAGG CTAACCCGAT TACTCAATGA ATACGTACAC
AAGATGCACT CAGGTTACGT GGAAAGATTA GGTGAAGAAG CGGGTTTCAC GGCCTTTAGC
GAGTACTTAA GTCAGAGCAT CACCAGTATT AAGAAGCGAC TCGGTAGCCA GTTGCATGAT
GAGTTTCAAA CCATCATCTC CAAAGCATTG AATATGCAAT TACAACAAAA TGACACTCAA
GGTCATCTTG AATGGATATC ACTGCTGCTT ACTCGATACT ACGATCCTAT GTATCAGTAT
CAGCTCGAAC AGAAACAGGA AAGGGTCATC TTCAAAGGCT CACATCAAGC GATGCATGAG
TGGTTAGATC ACTATCGAAA CAGGTAA
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| Protein sequence | MSRNIIPKTT YQEIMLSGHP MIDVRAPIEF DKGAFPSSSN FPLMQDSERQ RVGTCYKEQG
QDAAIALGHS LVNGKVKQQR VDAWLAFIKQ HPDAYLYCFR GGLRSQLSQQ WIKEAGVDIP
YVEGGYKAMR QYLIEVIDNA PAKQPVFILS GITGSGKTDF LLQRSEAVDL EGYAHHRGSS
FGRYHEGQPT QINFENQLAV ALLKHQERKE QCLLVEDESF LIGRSAIPKA FYEGMQNADI
LVLEEPEETR LTRLLNEYVH KMHSGYVERL GEEAGFTAFS EYLSQSITSI KKRLGSQLHD
EFQTIISKAL NMQLQQNDTQ GHLEWISLLL TRYYDPMYQY QLEQKQERVI FKGSHQAMHE
WLDHYRNR
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