Gene Swoo_4702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4702 
Symbol 
ID6119071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5672460 
End bp5673011 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content46% 
IMG OID641636276 
ProductNusG antitermination factor 
Protein accessionYP_001763047 
Protein GI170729021 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000069225 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000042395 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAG CAACTGAAGC TAAAAAAAGA TGGTACGTAG TCCAGGCATT TTCTGGTTAT 
GAGGGCCGTG TAACTAAGAC TCTGCATGAA TATATTCAGA TGCACAGCAT GGAGCAGTAT
TTCGGCGAAA TACTCGTCCC TACAGAAGAA GTTGTAGAGA TGCGTGCCGG TCAGCGACGT
AAAAGTGAGC GTAAATTCTT TCCAGGTTAT GTACTAGTAC AGATGGAGAT GAATGACGAA
AGCTGGCATT TAGTGAAGAG CATTCCACGT GTAATGGGCT TCATCGGTGG CACATCAGAT
CGTCCTGCAC CTATCTCTGA CAAAGAAGCG AACGCTATTC TTCAACGCTT ACAAGAGACT
ACTGAGACTC CAACGCATCG CGTTATCTTT GAGCCAGGCG AAGTCGTACG CGTTACTGAT
GGTCCTTTTG CTGACTTCAA CGGCACTGTT GAAGAGGTTG ATTATGAGAA GAACCGCGTT
AAGGTTTCTG TCATGATCTT CGGTCGTTCT ACTCCGGTTG AACTAGACTT CGGTCAGATC
GAAAAAAGCT GA
 
Protein sequence
MTEATEAKKR WYVVQAFSGY EGRVTKTLHE YIQMHSMEQY FGEILVPTEE VVEMRAGQRR 
KSERKFFPGY VLVQMEMNDE SWHLVKSIPR VMGFIGGTSD RPAPISDKEA NAILQRLQET
TETPTHRVIF EPGEVVRVTD GPFADFNGTV EEVDYEKNRV KVSVMIFGRS TPVELDFGQI
EKS