| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4692 |
|---|
| Symbol | |
|---|
| ID | 6119061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5656902 |
|---|
| End bp | 5658086 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641636266 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001763037 |
|---|
| Protein GI | 170729011 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000201844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000372179 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAAAG AAAAATTTGA ACGTAGTAAA CCGCACGTAA ACGTAGGTAC AATTGGTCAC
GTCGACCATG GTAAAACTAC TCTTACAGCA GCTATCTCAG CTGTATTGAC TAAGACTTAC
GGTGGTGAAG CTCGTGACTT CGCACAGATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACAATTA ATACTTCTCA CATCGAATAT GACACTCCAT CACGTCACTA CGCACACGTA
GATTGTCCTG GTCACGCCGA TTATGTTAAA AACATGATCA CTGGTGCTGC TCAAATGGAC
GGCGCGATCC TAGTAGTTGC TTCTACAGAT GGTCCAATGC CACAGACTCG TGAGCACATC
CTGCTTTCTC GTCAGGTTGG CGTACCTTTC ATCATCGTAT TCATGAACAA GTGTGACATG
GTTGATGACG AAGAGCTTCT AGAGCTAGTA GAGATGGAAG TTCGTGAACT TCTTTCTGAG
TATGAATTCC CAGGTGATGA CCTACCAGTT ATCCAAGGTT CTGCACTTAA AGCTCTTGAG
GGCGACGCAG CATGGGAAGC TAAGATTCTT GAGCTTGCAG AAGCACTAGA TACTTACATT
CCAGAGCCAG AGCGTGCAAT TGATGGTGCA TTCATTCTTC CAATCGAAGA TGTTTTCTCA
ATCTCAGGCC GTGGTACAGT TGTAACTGGT CGTGTTGAGC GCGGTATCAT CAAAGTTGGT
GAAGAAGTAG AAATCGTTGG TATCAAAGAT ACTACTAAGA CTACTTGTAC TGGTGTTGAG
ATGTTCCGTA AGCTTCTTGA CGAAGGTCGT GCTGGTGAGA ACTGTGGTGT TCTTCTACGT
GGTACTAAGC GTGAAGACGT TGAGCGTGGT CAAGTACTTG CACAGCCAGG TTCAATCACT
CCACACACAA CTTTCCAGTC AGAGATCTAC GTTCTGTCTA AAGAAGAAGG TGGACGTCAC
ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACCGGT
ACTATCGAAT TGCCAGAAGG CGTAGAGATG GTAATGCCTG GTGATAACGT ACAGATGACT
GTAACGCTAA TCTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGT
GGTCGTACAG TTGGTGCTGG TGTTGTAGCT AAGATCATCG CTTAA
|
|---|
| Protein sequence | MAKEKFERSK PHVNVGTIGH VDHGKTTLTA AISAVLTKTY GGEARDFAQI DNAPEERERG
ITINTSHIEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDM VDDEELLELV EMEVRELLSE YEFPGDDLPV IQGSALKALE
GDAAWEAKIL ELAEALDTYI PEPERAIDGA FILPIEDVFS ISGRGTVVTG RVERGIIKVG
EEVEIVGIKD TTKTTCTGVE MFRKLLDEGR AGENCGVLLR GTKREDVERG QVLAQPGSIT
PHTTFQSEIY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNVQMT
VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIIA
|
|---|
| |