| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4689 |
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| Symbol | rplD |
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| ID | 6119058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5654898 |
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| End bp | 5655503 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636263 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001763034 |
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| Protein GI | 170729008 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000512006 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000221603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGAATTGG TATTGAAAGA CGCACAAAGT GCTCTTGAAG TTTCCGAAAC TACCTTCGGC
CGTGACTTTA ATGAAGCACT GGTTCATCAG GTAGTTGTAG CATACGCTGC AAACGCGCGT
CAGGGCACTC GTGCTCAAAA GACTCGCGCA GAAGTTGTTG GTTCTGGCAA AAAGCCATGG
CGCCAAAAAG GTACTGGCCG TGCACGTGCT GGTACTGTTA AAGGCCCAAT CTGGCGTGGC
GGTGGCGTAA CATTCGCTGC TAAAGCTCAA GATCACAGCC AAAAAGTAAA CAAGAAGATG
TACCGCGGAG CGCTGAAAAG CATTTTCTCT GAGTTGGTAC GTCAAGACCG TCTAATCGTG
GTTGAGTCGT TTGGTGTTGA AGCTCCTAAA ACTAAAGAGC TTAAAGCTAA ACTGGCTGAA
ATGAACCTGG AAGACGTGTT GATTGTTACT CCAGAAATTG ACGAGAACTT GTTCTTGGCT
GCTCGCAACT TGTACAAAGT TGACGTACGT GACGTAGCTG GTATCGATCC AGTAAGTCTA
ATCGCGTTCA ACAAAGTACT AGTAACTGCC GATGCTGTTA AGCAAATCGA GGAGATGCTG
GGATGA
|
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| Protein sequence | MELVLKDAQS ALEVSETTFG RDFNEALVHQ VVVAYAANAR QGTRAQKTRA EVVGSGKKPW
RQKGTGRARA GTVKGPIWRG GGVTFAAKAQ DHSQKVNKKM YRGALKSIFS ELVRQDRLIV
VESFGVEAPK TKELKAKLAE MNLEDVLIVT PEIDENLFLA ARNLYKVDVR DVAGIDPVSL
IAFNKVLVTA DAVKQIEEML G
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