Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4676 |
Symbol | rpsH |
ID | 6119045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5649401 |
End bp | 5649793 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641636250 |
Product | 30S ribosomal protein S8 |
Protein accession | YP_001763021 |
Protein GI | 170728995 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000540573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000898737 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCATGC AAGATCCTAT AGCGGATATG TTAACCCGTA TTCGTAATGG CCAAGCTGCT AAACACGTTT CAGTAACTAT GCCTTCTGCT AAGCTAAAAA TCGCTATCGC GAAAACGCTT AAAGAAGAAG GTTATATCAC TGACTACGCC GTAGCAGATG AAGCCAAGCC TGTTCTTGAA ATCACTTTAA AGTATTTCCA AGGTCAGCCA GTCGTTGAGA CTATCCAGCG CGTTAGCCGT CCTGGTCTTC GTATTTACAA AGGTAAAGAC GAACTACCAA AGGTTATGGG CGGACTGGGT GTCGCTATTG TGTCCACTTC TAAAGGTTTG ATGACTGATC GTACTGCCCG CCAAAATGGC ATGGGCGGGG AAGTTATCTG CTACGTAGCA TAA
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Protein sequence | MSMQDPIADM LTRIRNGQAA KHVSVTMPSA KLKIAIAKTL KEEGYITDYA VADEAKPVLE ITLKYFQGQP VVETIQRVSR PGLRIYKGKD ELPKVMGGLG VAIVSTSKGL MTDRTARQNG MGGEVICYVA
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