Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4675 |
Symbol | rplF |
ID | 6119044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5648860 |
End bp | 5649390 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641636249 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001763020 |
Protein GI | 170728994 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000105609 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000908127 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCTCGTG TCGCAAAAGC ACCAGTCGCT ATCCCTGCAG GCGTAGAAGT GACTTTAAAC GAACAAACTA TCACCGTAAA AGGTACTAAA GGTAGTTTGA CTCGAGTAAT TAACACTGAT GTTATCGTTG TTGTTGAAGA TAACGAAATC AAGTGTAGTT CTGTTGAAGG CGTTAAAACT AACGCTCAAG CAGGTACAGC TCGAGCTTTA ATCAATAACA TGGTTGTTGG TGTTACAGAA GGTTTTGAAA AGAAACTTCA GTTAATTGGT GTTGGTTACC GTGCGAAAAT CGCTGGTAAC GGCGTTGATT TAACTCTAGG TTTCTCTCAC CCACTAGTAC ACGAACTCCC AGACGGCGTA TCAGCTGTTT GTCCTTCTCA AACTGAAATC GTACTTACTG GTACTGATAA GCAGCTTGTA GGTCAAGTAG CAGCTGAGAT TCGCGGCTAC CGTCCACCAG AGCCTTACAA AGGTAAAGGT GTTCGCTACG CTGACGAACA AGTACGTCGT AAAGAGGCTA AGAAGAAGTA G
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Protein sequence | MSRVAKAPVA IPAGVEVTLN EQTITVKGTK GSLTRVINTD VIVVVEDNEI KCSSVEGVKT NAQAGTARAL INNMVVGVTE GFEKKLQLIG VGYRAKIAGN GVDLTLGFSH PLVHELPDGV SAVCPSQTEI VLTGTDKQLV GQVAAEIRGY RPPEPYKGKG VRYADEQVRR KEAKKK
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