| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4674 |
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| Symbol | rplR |
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| ID | 6119043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5648499 |
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| End bp | 5648849 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641636248 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001763019 |
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| Protein GI | 170728993 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000567326 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000872003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AAACATCTCG CTTGCGTCGC GCACTACGCG GTCGTAAGAA GATCCAAGAG
CTGGGCGTTA ACCGTCTGGT TGTACATCGT ACACCACGTC ACACCTATGC TCAGGTAATT
AGCCCTGATT CACAGGTTTT GGCGTCAGCT TCTACTGCTG AGAAAGCGGT AACAGAGCAG
CTAAAGTACA CAGGTAACGT TGATGCAGCT AAAGTAGTGG GTAAAACCGT TGCTGAGCGT
GCTATCGAAA AAGGCGTAAC TGTAGTTGCA TTCGATCGTT CCGGTTTCAA GTATCACGGC
CGTGTTGCTG CTCTAGCAGA CGCCGCTCGT GAAGCTGGCC TCAAGTTCTA A
|
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| Protein sequence | MDKKTSRLRR ALRGRKKIQE LGVNRLVVHR TPRHTYAQVI SPDSQVLASA STAEKAVTEQ
LKYTGNVDAA KVVGKTVAER AIEKGVTVVA FDRSGFKYHG RVAALADAAR EAGLKF
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