| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4670 |
|---|
| Symbol | secY |
|---|
| ID | 6119039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5646005 |
|---|
| End bp | 5647345 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641636244 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_001763015 |
|---|
| Protein GI | 170728989 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000509869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000121988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAAGGTG GATTTTCAGA ACTGAAGACT
CGCCTCCTGT TCGTGATTGG TGCAATTATC GTCTTTAGAG CCGGTTCGTT TGTACCAATT
CCTGGTATTG ACGCTGCTGT ATTAGCAGAG CTGTTCAATC AGCAGAAGGG GACCATCCTA
GGCATGTTTA ACATGTTCTC TGGTGGTGCC CTTGAACGTG CTTCTATCTT TGCATTAGGT
ATCATGCCGT ATATTTCGGC GTCGATTATC ATGCAACTAT TGACTGTGGT ACACCCAGCA
TTAGCCGAAC TGAAAAAGGA AGGCGAATCT GGTCGTAAGA AGATCAGTCA ATATACACGA
TATGGCACAT TGGTCCTGGG TACATTCCAG GCAGTCGGTA TCGCAACAGG TTTACCAAAC
TTAGTTCCAG GTTTAGTAGT AAATCTTGGA TTTGGTTTTT ACTTTGTTGC TGTTGTGAGT
CTAGTGACAG GAACTATGTT CCTTATGTGG CTAGGTGAGC AGATCACCGA ACGAGGCATA
GGAAACGGTA TCTCGATATT AATTTTCGCA GGTATTGTTG CTGGCCTACC ATCTGCTATC
GGCCAAACGG CTGAGCAGGC GCGTCAAGGT GACTTGAACG TACTCGTATT GTTGTTGATT
GCTGTTATTG TATTTGCCGT AACTTATTTC GTTGTATTTG TGGAACGTGG TCAGCGTCGT
ATCGTCGTTA ACTATGCTAA GCGTCAGCAG GGCCGTAAGG TGTTTGCAGC GCAGAGTACA
CATCTACCTC TGAAGATAAA CATGGCAGGC GTAATACCAC CAATTTTTGC GTCGAGCATC
ATTTTGTTCC CAGGCACACT GGCTCAGTGG TTTGGTCAAA ATGAGTCCTT ATCATGGTTA
AGTGATTTTT CACTTGCTGT GTCACCAGGA CAGCCGCTCT ACTCATTATT GTATGCGTCA
GCAATCATCT TCTTCTGTTT CTTCTATACT GCGTTGGTGT TCAACCCGCG TGAGACAGCA
GATAACTTGA AGAAGAGTGG TGCGTTTATT CCCGGGATCC GTCCTGGAGA ACAGACTTCG
CGTTACATTG ATAAAGTTAT GACTCGCTTG ACATTAGCTG GCGCATTGTA CATTACCTTT
ATCTGTTTAA TTCCGGAGTT CATGTTAATT ACGTGGAAAG TACAGTTCTA TTTTGGCGGT
ACTTCACTAC TTATTATGGT AGTCGTAATC ATGGACTTCA TGGCTCAAGT TCAGACCCAT
ATGATGTCTC ATCAATATGA ATCTGTAATG AAGAAAGCTA ACCTAGTTAA CAAAGCGAAT
TTAGATCGCT TTGGTCGCTA A
|
|---|
| Protein sequence | MAKPGLDLKS AKGGFSELKT RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFNQQKGTIL
GMFNMFSGGA LERASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR
YGTLVLGTFQ AVGIATGLPN LVPGLVVNLG FGFYFVAVVS LVTGTMFLMW LGEQITERGI
GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLI AVIVFAVTYF VVFVERGQRR
IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESLSWL
SDFSLAVSPG QPLYSLLYAS AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS
RYIDKVMTRL TLAGALYITF ICLIPEFMLI TWKVQFYFGG TSLLIMVVVI MDFMAQVQTH
MMSHQYESVM KKANLVNKAN LDRFGR
|
|---|
| |