| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4662 |
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| Symbol | |
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| ID | 6119031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5641468 |
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| End bp | 5641668 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641636236 |
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| Product | heme exporter protein CcmD |
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| Protein accession | YP_001763007 |
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| Protein GI | 170728981 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.270575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000168562 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGTTCG ATTCATTAGC AGATTTTTTC AATATGGGTG GCTACGCCTT TTATGTTTGG
CTAGCTTATG GTGTGACATT TTTTTCATTA GGTACTCTAG TCATTTCAAG TTTACGCCAG
AAAAGAAAGG TGTTAACTGA AATAGCGAAG AAGATACAAC GTGAAGATCG TTTAAAAGCA
AACCGGAGTA ATCAACAGTG A
|
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| Protein sequence | MQFDSLADFF NMGGYAFYVW LAYGVTFFSL GTLVISSLRQ KRKVLTEIAK KIQREDRLKA
NRSNQQ
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