| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4660 |
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| Symbol | |
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| ID | 6119029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5640034 |
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| End bp | 5640720 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636234 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_001763005 |
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| Protein GI | 170728979 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000168562 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG GCATCAGTTT CAGACAGGCA TTTTTCACGC TTTTAAAGCG TGATCTTCAG
ATTGCTATTC GACACAAAGG GGACATATTT AACCCTTTAC TGTTTTTTAT CTTAGTAGTG
ACATTGTTCC CGCTAGGTAT AGGCCCAGAG CCTCAAGTAC TATCAAGAGT TGCACCAGGT
GTTATCTGGG TCGCAGCCTT GCTCGCCTCC ATGTTGTCAC TGGAGCGACT GTTCAAAGCT
GACTATGCCG ATGGCAGCTT AGAGCAGATG TTATTAAGCC CTCAGCCACT CCCTTTAATG
GTACTGGCAA AGGTATTGGC ACACTGGCTT TTAACAGGTG TTCCACTCAT TTTAGTGGCG
CCATTATTAG CAGTGCTTTT GCATTTAGAC GGTAACAGCT ACGGAGCACT CATTGCGACC
TTAGCACTTG GCACACCTGT ATTGAGCCTA CTTGGCGCCA TAGGTGTAGC ACTTACGGTA
GGCTTACATA AAGGCGGTGT ATTACTAAGC CTATTAATCT TACCTTTGTA TATTCCAGTG
CTCATATTTG CCACCACGGC AATTGATGCA GCTGGTCTTA ATTTACCCTA TAGCGGTCAT
CTCGCGATTA TTGGTGCGAT GCTGGTCGGT TCATTAATAT TGGCACCCTT TGCAATAGGT
GCTTCGTTAA GAGTGAGTAC TAACTAA
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| Protein sequence | MKKGISFRQA FFTLLKRDLQ IAIRHKGDIF NPLLFFILVV TLFPLGIGPE PQVLSRVAPG
VIWVAALLAS MLSLERLFKA DYADGSLEQM LLSPQPLPLM VLAKVLAHWL LTGVPLILVA
PLLAVLLHLD GNSYGALIAT LALGTPVLSL LGAIGVALTV GLHKGGVLLS LLILPLYIPV
LIFATTAIDA AGLNLPYSGH LAIIGAMLVG SLILAPFAIG ASLRVSTN
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