| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4650 |
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| Symbol | |
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| ID | 6119016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5624226 |
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| End bp | 5625272 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641636221 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001762995 |
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| Protein GI | 170728969 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.617913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACAA AACACCTGCT CAATAATCTG GTCACTGCTG TGATTGTGAT CGATGCAGAT
CTAAAACTCT GCTACGCAAA TGCGGCTGCA GAACAGCTAT TAGGTGTCGG AATTCATCGC
TTAACAGAAC ATTTCCTTGC TGATAATTTT CGACTTATTG GTGTTAGTAA TGAACTACTA
ACAGAGTCTA TTAAGGAAAA TCAGGGGTTA ACGGTTAATA CTGCTTCATT AATTACATTT
GATAATCAGC ATCATACAGT TGATATTACT CTTTCTCCTC TAGAACAAGA GCAGGGTCTT
GCGTTGCTAG AGCTGCGTCA GGTCGACCAA CAACTGCGTA TTCACCAGCA GCTAACCCTT
GATGCTCAGC AGCAGGCTGC GCAGTACCTA GTACGAAACC TAGCTCATGA AATTAAAAAC
CCGTTGGGCG GTCTTCGTGG TGCAGCACAA CTATTATCCA GAGAGCTACA CGATCCCCAA
CTCAATGAGT TTACTGATCT CATCATTGAG CAAGCCGATA GGTTACGAAA CTTAGTTGAC
CGTTTACTTG GCCCGCAAAA GCCGACTAAA CATAGTCTGC ATAATATCCA TGAAGTTATT
CAGAAAGTAC TAAAGCTTGT TTCTATGGCG CTCCCAGAAA ATATAGATTT AGAGCAAGAT
TATGATCCAT CTATACCTGA TATCCAGATG GATCCTGAGC AACTACAACA GGCGATACTC
AACATAGTAC AAAATGCCGT TCAAGCCTTG GAATGCGGTG GTGGGAATAT TCTTATTAAG
ACACGCACGC AGCATCAGGT AACAATAGGA ACCGAAAGGC ACAAGTTAGT ACTAGCACTA
TCGATTATAG ATAATGGCCC TGGGGTAAAA CCTGAGCTAT TGGACACTCT CTTCTACCCT
ATGGTCACTG GACGAGATAA TGGCTCAGGG CTAGGTTTAT CAATCTCGCA CAACTTTGCC
AGATTGCATG GAGGTAGAAT CGACTGCCAA TCAACCTCTG CTGGAACAGA GTTCACCATT
TTACTGCCAA TTGAAAACAA TAATTAA
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| Protein sequence | MDTKHLLNNL VTAVIVIDAD LKLCYANAAA EQLLGVGIHR LTEHFLADNF RLIGVSNELL
TESIKENQGL TVNTASLITF DNQHHTVDIT LSPLEQEQGL ALLELRQVDQ QLRIHQQLTL
DAQQQAAQYL VRNLAHEIKN PLGGLRGAAQ LLSRELHDPQ LNEFTDLIIE QADRLRNLVD
RLLGPQKPTK HSLHNIHEVI QKVLKLVSMA LPENIDLEQD YDPSIPDIQM DPEQLQQAIL
NIVQNAVQAL ECGGGNILIK TRTQHQVTIG TERHKLVLAL SIIDNGPGVK PELLDTLFYP
MVTGRDNGSG LGLSISHNFA RLHGGRIDCQ STSAGTEFTI LLPIENNN
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