| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4645 |
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| Symbol | |
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| ID | 6119011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5616153 |
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| End bp | 5618999 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641636216 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001762990 |
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| Protein GI | 170728964 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGCC CGTCTCCCGA TACAGAGAAT CAACCTCATA CCATAAGGAG CATCGCATTA
AAGCTTAACC TAAGCACTCT GTTTATAGGT ACATTACTCT GTGGCATTCT GGCTATATAT
TTTTTTCAAG AGACGCAAGA GAGAGTAAAA GAGCAGGCTA GCATTGAGCT TACTCAAATC
ACCGACACAT TAAAGCTCGC ACTAGAAACC AACTCCCAGC TCTCCAATAT GATCCGTATT
GTGGGGGTCT TAACAACCAA TAAAAATATT GATCGCCTTT CGGTGATTAA GTCATCTGAT
ATGAGAGTTA ATGCCGATAG TTTAACTCAA TATAATGGAA GGTTAGCTAA AGAGGTCTTT
CCCGCTCCTA TTATGGAGCT GTTAACTAAT CCAGCAAGAG TTCATGATCA ACAATCTGGT
GAGTTTATTG GCAACCATTT ACACCATGCA GTTCAATTTC ACTTAATCGA TCCTGAAGTA
AACCGCCTCA GGCCTTACAT CATCTACTTC AAATATGACA AAACCCTATT AGAAGCAGGA
ATCAATCAAA CTCGTAATAA CTACCTGCTT ATTGTCATAT GTGCATTTAG TTCACTTCTG
CTTATTAACC TATGGATACA TAAAGTGGTG GTACTCACCC CACTATCTCA GATCACAGCT
CAACTTAAGC ACCAAGCTGG ACGCAATATC AGCCCAAAGC CCCTAAAAAT CTCTACAAGG
GATGAGTTCA GTATACTTGC CAATAGCTAT AACCACTCTG TTCATACTCA GCTACTGCAA
AAAAAGGAGC TGGAAAAATC TCACCGCCAT ATAAAGAATA TGACTAGAGT GCTTCCTGTA
CATTTGATCT ATGTCGATAC CAAACAAAAA ATTCAATTTA TTAACCGTCA CAGCCTTAAC
TGGTTGGATT GTGAAAGCAA TGAGGTGTTG AACCGCACCT GTGAGGCGAT CATCCCCCCT
AAACTTTTTA AACTTATGGC TCCCTTCATT GAACAAACCC TTAAAGGAGA GACATTAACC
TTTGATGCTG AGTTCCAACA CCTCAATAGT GAGGAGCTCA ACTTCCATAT CACTCAAGTA
CCAGACATTG ATGCGGATGG GAAGATAAAT GGTTTTTTTG TCTGCATAGA AGATCAGACT
CAAACAAGGA ACAATGAGAA GAAAATTGAA AAGTATGCTC AGGATCTTGA GTTTAATAAC
TGGGCTCTGG ATGAAGCCCG TGAAGAGGCT GAGGCCACAG GAAGAGCGAA ATCTGAATTT
CTTGCTTGTA TGAGCCATGA GATCCGAACA CCAATGAATG GCGTGCTAGG CATGCTTAGC
CTGCTAAGCA GAACTGAGTT AGATCAAGAT CAGCAACACC ACCTAGAGAT AGCCCAAGGT
AGTGCTAAGT CTTTGCTTAC TCTAATCAAT GACATTCTGG ACTTCTCTAA GATTGAATCA
GGAAAACTCA ATCTTGAGTC TATCGAGTTT AATCTGCATC AAACTTTAGA TGAGCTAATA
CAGCCATTAG CCATTCGAGC GCAAGAGAAG AGCCTTGAAT TAACACTAGA CATAAGCCAG
ATCAAACCCG CGAATATTAC TGGAGATCCA GGGAGAATCA CCCAAGTCTT AACCAACCTA
ATAGGGAATG CCATAAAGTT TACCCCTAAA GGCAGCATTA TCGTAACCGG AAAGCTGACC
GCTAAAAATA ATAATCATCG CCTGACTTTT TCAATCCAAG ATACAGGCAT TGGGATGAAG
CAAGATAAGC TCGAAAACAT ATTTCAAGCC TTTAGCCAAG CAGACAATTC AACCACTCGA
CACTACGGTG GAACAGGGCT AGGACTCTCT ATCGCAAAAC ACCTCAGCCA CCTGATGAAT
GGAGATATCT CAGTTACCAG CAAAGAGAAT ATAGGCAGTC ACTTCGTAGT AGACCTTGAG
ATCCAACTAC CAGACTCCAA CTCAATGAAA CAAGATAACT CCATACTCGA CCTCAATAAG
CTCCCCGTAT TGTTACTAAG CAAAGCCTCG TTTGCCGATA ATATACTTGA GAAGATTTTC
AGAGAATTTA ATGCAGATAT TGAGAGACTA GTCGTAAAGG GAAATGACAA AACTATTGAT
TTGAGTAAAT TAACCAACCC TCATCCCCAA TTGATTATTT TGAGCCTATC AGCAGGAGAA
CAAGCTATCA GAGCTGAGCT AGAGAAGCTA AACAGTGAAC CATTACTATC AAACATTACA
ACCTTGCTAA GTTACAACTC AATAGATGCA CCGATTATTC ATCACTATTT ACAGAAGCAG
ATCTGTGGAG CCTTCACTAA ACCAATCTCA CAAATCAGAC TTGCCTCCCT GCTCACCAAA
TACAATCAAG CACACACCTC CTCTTCTCAT GAAGTTACAG TGGACTCTGG CGATGACTGG
CTTCTAACAA ATCACTTCAC TCCCACTCAG CCTAGGCTGC TTTTGGCCGA AGATAATATG
GTCAATCAGC TTGTTGCCGA GGGGATCATC AAGGAGTTTG GTCTAGAAAT TGAGATAGTT
AACGACGGTA TTCAAGCTTT GAAAGCTTTA TCTGACTCTA GTCAAGATAA CCCCTACCAT
CTGATTTTCA TGGACTGTCA GATGCCTAAA CTAGACGGTT ACCAAACCAC AGCCAAAATT
CGTGATGGTG AAGCGGGGGA GCATTACAAA AACCTCCCCA TCATAGCAAT GACAGCAAAC
GCTATGGTTG GTGACAAGGA AAAATGCCTA GCGATCGGCA TGAATGACTA TATCTCCAAG
CCACTCGAGC CAGAACATAT CAAGACAGCT TTACTTACTT ACCTCGCTCA TCTCACAAAT
AAAAATGAAC AACGCCATTC AGGCTAA
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| Protein sequence | MESPSPDTEN QPHTIRSIAL KLNLSTLFIG TLLCGILAIY FFQETQERVK EQASIELTQI
TDTLKLALET NSQLSNMIRI VGVLTTNKNI DRLSVIKSSD MRVNADSLTQ YNGRLAKEVF
PAPIMELLTN PARVHDQQSG EFIGNHLHHA VQFHLIDPEV NRLRPYIIYF KYDKTLLEAG
INQTRNNYLL IVICAFSSLL LINLWIHKVV VLTPLSQITA QLKHQAGRNI SPKPLKISTR
DEFSILANSY NHSVHTQLLQ KKELEKSHRH IKNMTRVLPV HLIYVDTKQK IQFINRHSLN
WLDCESNEVL NRTCEAIIPP KLFKLMAPFI EQTLKGETLT FDAEFQHLNS EELNFHITQV
PDIDADGKIN GFFVCIEDQT QTRNNEKKIE KYAQDLEFNN WALDEAREEA EATGRAKSEF
LACMSHEIRT PMNGVLGMLS LLSRTELDQD QQHHLEIAQG SAKSLLTLIN DILDFSKIES
GKLNLESIEF NLHQTLDELI QPLAIRAQEK SLELTLDISQ IKPANITGDP GRITQVLTNL
IGNAIKFTPK GSIIVTGKLT AKNNNHRLTF SIQDTGIGMK QDKLENIFQA FSQADNSTTR
HYGGTGLGLS IAKHLSHLMN GDISVTSKEN IGSHFVVDLE IQLPDSNSMK QDNSILDLNK
LPVLLLSKAS FADNILEKIF REFNADIERL VVKGNDKTID LSKLTNPHPQ LIILSLSAGE
QAIRAELEKL NSEPLLSNIT TLLSYNSIDA PIIHHYLQKQ ICGAFTKPIS QIRLASLLTK
YNQAHTSSSH EVTVDSGDDW LLTNHFTPTQ PRLLLAEDNM VNQLVAEGII KEFGLEIEIV
NDGIQALKAL SDSSQDNPYH LIFMDCQMPK LDGYQTTAKI RDGEAGEHYK NLPIIAMTAN
AMVGDKEKCL AIGMNDYISK PLEPEHIKTA LLTYLAHLTN KNEQRHSG
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