| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4642 |
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| Symbol | |
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| ID | 6119008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5611440 |
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| End bp | 5613251 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636213 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001762987 |
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| Protein GI | 170728961 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.787157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAGAGA ATTTACGTAA CATCGCCATT ATTGCACACG TTGACCATGG TAAAACTACC
CTAGTTGATA AGTTGCTGGC GCAGTCCGGA ACCCTTGAGA CTCGAGGAGA GGCCACTGAG
CGGGTGATGG ATTCGAACGA TCTTGAAAAG GAGCGTGGGA TCACGATTCT GGCAAAGAAT
ACTGCCATCA AGTGGAACGA CTACCGCATC AACATCGTGG ATACTCCTGG TCACGCCGAT
TTCGGTGGTG AAGTTGAGCG TGTTCTTTCT ATGGTTGATT CAGTACTGCT TCTTGTTGAC
GCGGTTGATG GCCCAATGCC ACAGACTCGC TTTGTAACTA AGAAAGCATT TGCTCAAGGC
CTTAAGCCTA TTGTTGTTAT CAACAAGATT GACCGTCCAG GTGCTCGCCC TGACTGGGTT
ATCGATCAAG TATTCGATCT GTTTGATAAC TTAGGCGCGA CTGATGAGCA GTTAGATTTC
CCAATCGTTT ATGCTTCAGC GCTAAACGGT TTTGCTTCTC TTGATCCAGA AACAACAGAG
GGTGATATGA CACCTCTGTT TGAAACGATC ATCGAGAAAG TTTCATCTCC TGATGCTGAT
GCAGAAGGTG ATTTCCAGAT GCAAATTTCG CAGCTGGACT ACAACTCATA CGTAGGTGTT
ATCGGTGTTG GTCGTATCAA GCGCGGTAGT GTTAAGACTA ACCAGCAAGT GACTATCATT
GATGCTGAAG GTAACAAGCG TAACGGTAAA ATGGGCCAAG TATTAGGTTA CATGGGTCTA
GAGCGTCACG AAGTTTCTGA AGCAAATGCT GGTGACATCG TTGCGATTAC TGGTCTTGGT
CAGTTAAAGA TTTCTGACAC TGTTTGTGCA ACAACTACTG TTGAAGCGCT ACCTCCATTG
TCTGTTGATG AACCAACACT AACAATGACT TTCCAGGTAA ACACCTCTCC ATTCGCGGGT
AAAGAAGGTA AGTACGTGAC GTCACGTAAC ATCCTTGAGC GTCTAGAGCA GGAGCTTGTT
CACAACGTAG CACTACGTGT TGAAGAGACT GACAGCCCAG ATCGTTTCCG CGTATCAGGC
CGTGGTGAGC TTCACCTATC TATCTTGATT GAAAACATGC GTCGTGAAGG TTACGAGTTA
GCCGTTTCTC GTCCAGAAGT TATCATGAAA GAGATTGATG GCGAGATGTG TGAGCCGTTC
GAAACACTAA CTGTTGACGT TCAAGAGGAA CACCAAGGTA CAGTGATCGA GAAGCTTGGT
ACTCGTAAGG GTGACATGAA AGATATGCAG CTAGATGGTA AGGGTCGTGT ACGTATCGAC
TTCGTTATCC CTAGCCGTGG TCTAATCGGT TTCCAAACTG AATTCATGAC AGCGACTTCT
GGTACTGGTC TTATCTACCA CTCATTTGAC CACTACGGTC CAGTGAAAGG TGGCGATATC
GGTCAACGTG CACGTGGTGT ACTGATCTCT AACGCTACTG GTAAAGCACT AACCTTCGCA
CTATTCGGTC TACAAGAGCG TGGTCGTCTA TTCATTACTC ACGCTGCTGA AGTATATGAA
GGTCAAGTGG TTGGTCTACA CGCACGTGCT AACGACCTAA CAGTTAACTG TTTGAAAGGT
AAGCAGCTAA CTAACATGCG TGCATCTGGT ACTGATGAAG CACAGGTACT AACTCCACAT
ATCGAAATGA CACTTGAGCA AGCGCTTGAG TTTATCGATG ATGATGAGCT AGTAGAAGTA
ACGCCACAGA ACATCCGTGT TCGTAAGCGT TTCTTGACTG AAAACGAGCG TAAGCGTCAT
AACCGCAAGT AA
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| Protein sequence | MLENLRNIAI IAHVDHGKTT LVDKLLAQSG TLETRGEATE RVMDSNDLEK ERGITILAKN
TAIKWNDYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTKKAFAQG
LKPIVVINKI DRPGARPDWV IDQVFDLFDN LGATDEQLDF PIVYASALNG FASLDPETTE
GDMTPLFETI IEKVSSPDAD AEGDFQMQIS QLDYNSYVGV IGVGRIKRGS VKTNQQVTII
DAEGNKRNGK MGQVLGYMGL ERHEVSEANA GDIVAITGLG QLKISDTVCA TTTVEALPPL
SVDEPTLTMT FQVNTSPFAG KEGKYVTSRN ILERLEQELV HNVALRVEET DSPDRFRVSG
RGELHLSILI ENMRREGYEL AVSRPEVIMK EIDGEMCEPF ETLTVDVQEE HQGTVIEKLG
TRKGDMKDMQ LDGKGRVRID FVIPSRGLIG FQTEFMTATS GTGLIYHSFD HYGPVKGGDI
GQRARGVLIS NATGKALTFA LFGLQERGRL FITHAAEVYE GQVVGLHARA NDLTVNCLKG
KQLTNMRASG TDEAQVLTPH IEMTLEQALE FIDDDELVEV TPQNIRVRKR FLTENERKRH
NRK
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