| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4639 |
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| Symbol | |
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| ID | 6119005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5608459 |
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| End bp | 5609394 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641636210 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001762984 |
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| Protein GI | 170728958 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGCA ACGTATCCAT TAGTCAACTA ATTGATAGTG CCGAACAACA CTTTCAATTT
GGTGCTTACA CTAGAGGGAT AGAATGTTTA AGGGAGGCAT TATCTTTAGA GCCTGATAAT
GGCTTCTTAC ATAGTTATCT TTCATTTGCA CTCATAGAAA CAAAGCGCCG TACAGCAGCG
CTGTATGAAG CTGAAATTGG GCTGTCGTTA TCGCCAGACT CTTCATATGG ACACTATACA
TTAGGTTACG CTTACTTAGT AAATCAGAAG TTTGCTTTGG CAAGTGAGCA TTTAGATAAT
GCCATTGAGC GTGAGCCTGA CAATGCAATG TATCACTTGC TTAAAAGTCG TATATTTTTT
CAACAGAATA AATACCAAGA GGCACTTAAA ACGATTAAAC ATGCGTTAGA GTTAGCCCCT
AACAATTGTG ACGTTTTAAC TGAGTATGGA GATATTTTGC TTCAGTTAGG TAAAGTTGAT
GAAGCGGCAG AGTTTTATCA AAACGCGTTA CAGCGAGGGC CTCAAAATAT TAACGGCCTA
ATTGGTATGG GCACAGTTTT ATTGAAAAAA AACCAAGTTC AAGAAGCAAG AGAACATGCT
ATCTGGGCGC TTCAGCAGGC CCCTGACTAT GCTCCTGCAC TACGGCTTTT TACTCAGATA
AAAGCGAGAA GTAATCCTGT TATGGGAGTT TGGTGGCGTT TAAATAATTG GCTATCAAAT
GGTAGTAATA CCCGAATGGT TGTGCTTCTT ATATCAGGTT TTTTACTGTT TCAGGTTGCT
TCAATTGTGC TTGAAGATCT TGGCCATAAA AGTGTTGGTG AGGTAGTCTC AATGTTCTGG
CTTGGTATTG TGATCTACAG CTGGATTGGA CCTGCTTGGT TTAATCGAAT GCTAAAAAAG
GAGTTAGAGA CCGTTAGTTT AGATAAGGCA TTTTAG
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| Protein sequence | MDSNVSISQL IDSAEQHFQF GAYTRGIECL REALSLEPDN GFLHSYLSFA LIETKRRTAA
LYEAEIGLSL SPDSSYGHYT LGYAYLVNQK FALASEHLDN AIEREPDNAM YHLLKSRIFF
QQNKYQEALK TIKHALELAP NNCDVLTEYG DILLQLGKVD EAAEFYQNAL QRGPQNINGL
IGMGTVLLKK NQVQEAREHA IWALQQAPDY APALRLFTQI KARSNPVMGV WWRLNNWLSN
GSNTRMVVLL ISGFLLFQVA SIVLEDLGHK SVGEVVSMFW LGIVIYSWIG PAWFNRMLKK
ELETVSLDKA F
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