Gene Swoo_4637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4637 
Symbol 
ID6119003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5607091 
End bp5607954 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content49% 
IMG OID641636208 
Productpyridoxal kinase 
Protein accessionYP_001762982 
Protein GI170728956 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA TCCTATCCAT TCAATCCCAT GTGGTATTTG GCTGTGCCGG CAACAGTAGC 
GCAGTATTTC CTATGCGTCG TCTCGGCATG GAAGTGTGGC CGATCAATAC GGTGCAGTTC
TCTAACCACA CTCAATATGC ACAAGGATGG AAAGGCATGG TTATGCCGTC AGGGCAGATC
ACCGAATTAG TGCAGGGCTT AGATAACATT GGTGAGCTGA AAACCTGTGA TGCCATTTTA
AGTGGTTATC TGGGAAGTGC AGAGCAAGGG GGTGAAATAG TTGCTGCAGT GAAACAGCTA
AAAGCAGTCA ATCCTCAGGC GATCTATTTT TGCGATCCTG TTATGGGGCA CCCAGAGAAG
GGCTGTATAG TCGCACCTGG TGTGCAGGAG TTTCTTAAAA CCCAAGCCTT GGCCGCTGCC
GATATTATTG CGCCTAATTT ATTGGAGTTA GAGACCCTGA CTGACAGCAG CTTGCAGACA
CTTGATGAGG TGGTACAGGC TTGTGAAAGC CTGCTCAAAA CAGGCGTTGA GATGATACTG
GTGAAACACC TTGCTAAGGC TGCCACCAAT CAAGAGCAGT TTGAGATGTT GCTGGTGGAC
AAGAGCGGCA GCTACTTAGT CTCCCGTCCG CTGTATGAGT TTGACAAGCA ACCCGTCGGT
GTGGGCGACC TTATCAGTGG CCTAATGCTA GCTAACTTGC AAGCTGGCTA CAGCGCTGTT
GAGGCGTTTG AGCGCACTAA TGCCTCAGTG GATGCTGTAT TACTGGAAAC CTTCAATCAA
GGTGCCTATG AGTTGCAACT GATACGTGCG CAGAGTGCAA TTGCATCACC AGTGATTAAA
GAGCGTGCTC AAAAGATAGG GTAA
 
Protein sequence
MKRILSIQSH VVFGCAGNSS AVFPMRRLGM EVWPINTVQF SNHTQYAQGW KGMVMPSGQI 
TELVQGLDNI GELKTCDAIL SGYLGSAEQG GEIVAAVKQL KAVNPQAIYF CDPVMGHPEK
GCIVAPGVQE FLKTQALAAA DIIAPNLLEL ETLTDSSLQT LDEVVQACES LLKTGVEMIL
VKHLAKAATN QEQFEMLLVD KSGSYLVSRP LYEFDKQPVG VGDLISGLML ANLQAGYSAV
EAFERTNASV DAVLLETFNQ GAYELQLIRA QSAIASPVIK ERAQKIG