Gene Swoo_4630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4630 
Symbol 
ID6118996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5601088 
End bp5601963 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content42% 
IMG OID641636201 
ProductTIR protein 
Protein accessionYP_001762975 
Protein GI170728949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.788158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAA GCGTGTTTTT AAGTCATAAC CATAGCGACA AGGATTTTAT AAGAAAGCTT 
GCGAGAGACT TGGAAAGCCA TGGTGTTCGT TATTGGCTTG ATGAAGCGGA AATGAAAATA
GGCGATTCAC TGATACAGAA AATACGAGAA GGTATTGATT CTGTAGACTT CTTCGCCGTT
GTCTTATCTC CTAATTCTGT TGAAGCACCT TGGGTCGTGA ATGAGCTTGA TGTTGCTATG
AATCAACAGA TAAACGGAAA GCCTATTAAA GTACTCCCGA TTCTGCTTAA AGAGTGCGAG
CTTCCCGGAT TTCTGGTTGG GAAACTGTAT GGGGACTTTC AGAACGAAGC TCAGTACGAA
GACTCATTTA GAATACTCAT TAACAGTATC GGTTTGGTCT TCAATAAAAG TGTTATGAAC
TCTGAAAGAA GCTCAAACAG TCTTGGTACT GCGCTAGATA AAGCTTTCTT GAAAAGTTTG
CCTCTAATGT CAAAACCTTT CCACAGGCCA TTTCAGTATA TGGGGATGCC CATCCACAAG
GCTGAAGCAG AGGTTGGAGC CGCTGCGAAC TCTGTAGGTA ACATTATCGT CGAAAATGAT
GATTGTAGAA TGCTCCTAGA GGCTGAAGGA AACTTTATTA GCTATGTAGA AGTTGATCTG
AAAGCCACTG CTCCGCATTA CCAAAATCAA GAATTCGACT CTGAGCCAGT CCTTGGTGCT
TTGAGTATTG GATTGACGGA ACTTGATTTA GAAAGGAAGA AGACCCATTA TCACACCTAC
TATGACCATA GAAGAAAGCT CAAAGTCAGT GTCTCATGCC TTGGTGATGG AGAACCGCTC
ACCGTAGCAT TTAGTTCCAA ATACTATGGA ATGTAA
 
Protein sequence
MTISVFLSHN HSDKDFIRKL ARDLESHGVR YWLDEAEMKI GDSLIQKIRE GIDSVDFFAV 
VLSPNSVEAP WVVNELDVAM NQQINGKPIK VLPILLKECE LPGFLVGKLY GDFQNEAQYE
DSFRILINSI GLVFNKSVMN SERSSNSLGT ALDKAFLKSL PLMSKPFHRP FQYMGMPIHK
AEAEVGAAAN SVGNIIVEND DCRMLLEAEG NFISYVEVDL KATAPHYQNQ EFDSEPVLGA
LSIGLTELDL ERKKTHYHTY YDHRRKLKVS VSCLGDGEPL TVAFSSKYYG M