| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4630 |
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| Symbol | |
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| ID | 6118996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5601088 |
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| End bp | 5601963 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641636201 |
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| Product | TIR protein |
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| Protein accession | YP_001762975 |
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| Protein GI | 170728949 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.788158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATAA GCGTGTTTTT AAGTCATAAC CATAGCGACA AGGATTTTAT AAGAAAGCTT
GCGAGAGACT TGGAAAGCCA TGGTGTTCGT TATTGGCTTG ATGAAGCGGA AATGAAAATA
GGCGATTCAC TGATACAGAA AATACGAGAA GGTATTGATT CTGTAGACTT CTTCGCCGTT
GTCTTATCTC CTAATTCTGT TGAAGCACCT TGGGTCGTGA ATGAGCTTGA TGTTGCTATG
AATCAACAGA TAAACGGAAA GCCTATTAAA GTACTCCCGA TTCTGCTTAA AGAGTGCGAG
CTTCCCGGAT TTCTGGTTGG GAAACTGTAT GGGGACTTTC AGAACGAAGC TCAGTACGAA
GACTCATTTA GAATACTCAT TAACAGTATC GGTTTGGTCT TCAATAAAAG TGTTATGAAC
TCTGAAAGAA GCTCAAACAG TCTTGGTACT GCGCTAGATA AAGCTTTCTT GAAAAGTTTG
CCTCTAATGT CAAAACCTTT CCACAGGCCA TTTCAGTATA TGGGGATGCC CATCCACAAG
GCTGAAGCAG AGGTTGGAGC CGCTGCGAAC TCTGTAGGTA ACATTATCGT CGAAAATGAT
GATTGTAGAA TGCTCCTAGA GGCTGAAGGA AACTTTATTA GCTATGTAGA AGTTGATCTG
AAAGCCACTG CTCCGCATTA CCAAAATCAA GAATTCGACT CTGAGCCAGT CCTTGGTGCT
TTGAGTATTG GATTGACGGA ACTTGATTTA GAAAGGAAGA AGACCCATTA TCACACCTAC
TATGACCATA GAAGAAAGCT CAAAGTCAGT GTCTCATGCC TTGGTGATGG AGAACCGCTC
ACCGTAGCAT TTAGTTCCAA ATACTATGGA ATGTAA
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| Protein sequence | MTISVFLSHN HSDKDFIRKL ARDLESHGVR YWLDEAEMKI GDSLIQKIRE GIDSVDFFAV
VLSPNSVEAP WVVNELDVAM NQQINGKPIK VLPILLKECE LPGFLVGKLY GDFQNEAQYE
DSFRILINSI GLVFNKSVMN SERSSNSLGT ALDKAFLKSL PLMSKPFHRP FQYMGMPIHK
AEAEVGAAAN SVGNIIVEND DCRMLLEAEG NFISYVEVDL KATAPHYQNQ EFDSEPVLGA
LSIGLTELDL ERKKTHYHTY YDHRRKLKVS VSCLGDGEPL TVAFSSKYYG M
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