Gene Swoo_4622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4622 
Symbol 
ID6118988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5593239 
End bp5593931 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID641636193 
Producthypothetical protein 
Protein accessionYP_001762967 
Protein GI170728941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.417022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AGAGAGGAGC GTACAGGCGC TTTACCTTAA GCCTATTACT ATTAACGCTA 
CTACTTAGCG GTCTAATGCT ACTGCAAACC GAGCCTGCCA ACTCCAGCAT CGATGAGAGA
TTAATTAAGC TCTCGGCTCA AGGAGAAACA CTTGCCCCTT GGCAAGGGCC ATGGGCTTGT
ATTCACGACA CCCTTACCGG TTTACTTTGG GAAAACAAAA CCAATAACGA ATCGATACAT
GACGGTTACT GGAGCTACTC CTGGTTTAAT GAGGGCAAGG GCCAAACCAA TAGTGGAGAT
TGTTATTTTG AAGCCCAGCG ATGCGACACC CAAGACTTAA TCAGACGCAC AAATGAGGAG
AAATTATGTG GGATCACAGG GTGGCGGCTT CCAACCAAAG CTGAGCTCAG TAGTTTACTT
GAGCAACAAG ACCGCCCCCA AGCTCCTCAA CTACGAACCG ATTTCTTTCA GCAGATCAAA
GCTGGAGATT ACTGGAGTGC TCAAGGATCA ATGCCACTAG AGGGTCATTA TCAGCACTTA
GGCCAAGGAG CCAGCGCCAT CAATTTTTAC CAAGGGCGAT TTCATAACCT TCCCTATCGC
AATGCCGCAT TTGCCATTTT GGTCACAGAT AAGTGGCCAA AATCGCAATA TACCGCGGGA
GTGACCTCTC GCACTGTTAG CAAGCCAAAA TAG
 
Protein sequence
MKFKRGAYRR FTLSLLLLTL LLSGLMLLQT EPANSSIDER LIKLSAQGET LAPWQGPWAC 
IHDTLTGLLW ENKTNNESIH DGYWSYSWFN EGKGQTNSGD CYFEAQRCDT QDLIRRTNEE
KLCGITGWRL PTKAELSSLL EQQDRPQAPQ LRTDFFQQIK AGDYWSAQGS MPLEGHYQHL
GQGASAINFY QGRFHNLPYR NAAFAILVTD KWPKSQYTAG VTSRTVSKPK