Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4621 |
Symbol | |
ID | 6118987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5591722 |
End bp | 5593242 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636192 |
Product | hypothetical protein |
Protein accession | YP_001762966 |
Protein GI | 170728940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.363519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACC CCATAAAGTT TAAATGGTTG CATCTACTGT GCTCGTTAGC AGTCTTAGTA TCCTTGCTGA CAGGTTTTAG AATTCATCTA TTAAACGGCT ATGACACATT ATTCCTGTTA TCTCCTATCC TCCCTCAAGG GCAACTTCAC AACTGGCATC TCTTAGCCGG TATCTCAATC GCCCTATTAA TCCCGCTCTA TCTCATTTTT GGCCGCACAC ATGCGAACGG TAGACGTTCA CGAGCTGGAC GCTACCATCG AAATGTTCAC CGTTTAGCTT ACCTATTCAT TCCAGCGACC CTTATTACAG GGAGCATGCT TTGGTTAGGA GAGAGTGATT TAACATGGCG GCAATGGCAT TTTTACTCTG TCCTAGGCTT ACTCATCTAC ATCCTATTAC ATGGCTACAT CTACTTTCTT CAACTAGGTA AAACACTTCT CTCTGCACTT TTTTCCCGCC AAATGCTCAC TTTGAACGCC AGCCTCTTTA TCGCCCTATT TGGTTTAGCT GTTACCGCTA TCTGGGCATT AACAAGTAAC TTAGCTCCCC ACAAACTGAC AGCTTTGAAC ATTAATCCCC AAACCCATAT AGATATTGAT GGGAAAGCCC TTGAACCTTT CTGGAAACAA GCCCCAAAAA TTACCCTTAT CACAGACGGG GGAGCAAACT TTGTCGATGG CCAAACACCT GTCAGCATTC AAGTTGCAGC AAATGAAACA GAGTCCTATT TTCTTTTCCG TTGGCGCGAT ACAACTCACA GCCTAGAGCA TCTTCCTTTA GAGAAGCAGC AGAGTCGATG GTGGGTACTA CAACAAGGTT TCCATCGATT TGATGAACAA AAATTCTATG AAGATAAGTT TGCAGTCATG TTGTCTTCAA GCTGCGGTCA AGGAGGAGAT GGAACCGTTC ATCTAGGACC AAAACCATTA GCGGACAAAC CGGCAAACTG GCATGGAAAG GGCTATCACG CCAGCACCGA TGGACGCGTG CGTGATATCT GGCACTGGAA GGCGGTAAGA ACAAATGACA TGTTCCAAGC CGATGATAAC GCGTTTACCC CTCCTTTAGC CTCCCGCTCA GGAGAGAGGC GCTATACAGC AGGTTATCAT GCTGATGGTA AAGAGAGTGG CGCTTATGTC GCCAATTGGA GCTGGTACTC AAAACAGTCT GTAGAACCAA AGCGGCTTCC CCTTCATGAA AACACCAGTA AGCACCTCTT AGCTTGGTTT GACTCAGAAC CTTACCAAGC CAATAAAGAT AACTACCCAG AGGGTGCACG GTTACCCTCT ACTCTCTATC GCTCTAACCG CTTTGAGGGC GATAGAGCTG ATGTCAGAGC GAGAGCTGTG TGGCATCAAG GGTTCTGGAC CCTAGAGCTT GCACGTAAAC ATGACACAGG CTCAGAACTT GACGTTAAAC TCACAACAGG TACCTGTGTA TGGGTAGCTG CATTTGATTC AGCACAAATC GCCCACACAC GTCATCAACG CCCCATAAAA CTGAATTACC TATCACGATG A
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Protein sequence | MENPIKFKWL HLLCSLAVLV SLLTGFRIHL LNGYDTLFLL SPILPQGQLH NWHLLAGISI ALLIPLYLIF GRTHANGRRS RAGRYHRNVH RLAYLFIPAT LITGSMLWLG ESDLTWRQWH FYSVLGLLIY ILLHGYIYFL QLGKTLLSAL FSRQMLTLNA SLFIALFGLA VTAIWALTSN LAPHKLTALN INPQTHIDID GKALEPFWKQ APKITLITDG GANFVDGQTP VSIQVAANET ESYFLFRWRD TTHSLEHLPL EKQQSRWWVL QQGFHRFDEQ KFYEDKFAVM LSSSCGQGGD GTVHLGPKPL ADKPANWHGK GYHASTDGRV RDIWHWKAVR TNDMFQADDN AFTPPLASRS GERRYTAGYH ADGKESGAYV ANWSWYSKQS VEPKRLPLHE NTSKHLLAWF DSEPYQANKD NYPEGARLPS TLYRSNRFEG DRADVRARAV WHQGFWTLEL ARKHDTGSEL DVKLTTGTCV WVAAFDSAQI AHTRHQRPIK LNYLSR
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