Gene Swoo_4621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4621 
Symbol 
ID6118987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5591722 
End bp5593242 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content46% 
IMG OID641636192 
Producthypothetical protein 
Protein accessionYP_001762966 
Protein GI170728940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.363519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACC CCATAAAGTT TAAATGGTTG CATCTACTGT GCTCGTTAGC AGTCTTAGTA 
TCCTTGCTGA CAGGTTTTAG AATTCATCTA TTAAACGGCT ATGACACATT ATTCCTGTTA
TCTCCTATCC TCCCTCAAGG GCAACTTCAC AACTGGCATC TCTTAGCCGG TATCTCAATC
GCCCTATTAA TCCCGCTCTA TCTCATTTTT GGCCGCACAC ATGCGAACGG TAGACGTTCA
CGAGCTGGAC GCTACCATCG AAATGTTCAC CGTTTAGCTT ACCTATTCAT TCCAGCGACC
CTTATTACAG GGAGCATGCT TTGGTTAGGA GAGAGTGATT TAACATGGCG GCAATGGCAT
TTTTACTCTG TCCTAGGCTT ACTCATCTAC ATCCTATTAC ATGGCTACAT CTACTTTCTT
CAACTAGGTA AAACACTTCT CTCTGCACTT TTTTCCCGCC AAATGCTCAC TTTGAACGCC
AGCCTCTTTA TCGCCCTATT TGGTTTAGCT GTTACCGCTA TCTGGGCATT AACAAGTAAC
TTAGCTCCCC ACAAACTGAC AGCTTTGAAC ATTAATCCCC AAACCCATAT AGATATTGAT
GGGAAAGCCC TTGAACCTTT CTGGAAACAA GCCCCAAAAA TTACCCTTAT CACAGACGGG
GGAGCAAACT TTGTCGATGG CCAAACACCT GTCAGCATTC AAGTTGCAGC AAATGAAACA
GAGTCCTATT TTCTTTTCCG TTGGCGCGAT ACAACTCACA GCCTAGAGCA TCTTCCTTTA
GAGAAGCAGC AGAGTCGATG GTGGGTACTA CAACAAGGTT TCCATCGATT TGATGAACAA
AAATTCTATG AAGATAAGTT TGCAGTCATG TTGTCTTCAA GCTGCGGTCA AGGAGGAGAT
GGAACCGTTC ATCTAGGACC AAAACCATTA GCGGACAAAC CGGCAAACTG GCATGGAAAG
GGCTATCACG CCAGCACCGA TGGACGCGTG CGTGATATCT GGCACTGGAA GGCGGTAAGA
ACAAATGACA TGTTCCAAGC CGATGATAAC GCGTTTACCC CTCCTTTAGC CTCCCGCTCA
GGAGAGAGGC GCTATACAGC AGGTTATCAT GCTGATGGTA AAGAGAGTGG CGCTTATGTC
GCCAATTGGA GCTGGTACTC AAAACAGTCT GTAGAACCAA AGCGGCTTCC CCTTCATGAA
AACACCAGTA AGCACCTCTT AGCTTGGTTT GACTCAGAAC CTTACCAAGC CAATAAAGAT
AACTACCCAG AGGGTGCACG GTTACCCTCT ACTCTCTATC GCTCTAACCG CTTTGAGGGC
GATAGAGCTG ATGTCAGAGC GAGAGCTGTG TGGCATCAAG GGTTCTGGAC CCTAGAGCTT
GCACGTAAAC ATGACACAGG CTCAGAACTT GACGTTAAAC TCACAACAGG TACCTGTGTA
TGGGTAGCTG CATTTGATTC AGCACAAATC GCCCACACAC GTCATCAACG CCCCATAAAA
CTGAATTACC TATCACGATG A
 
Protein sequence
MENPIKFKWL HLLCSLAVLV SLLTGFRIHL LNGYDTLFLL SPILPQGQLH NWHLLAGISI 
ALLIPLYLIF GRTHANGRRS RAGRYHRNVH RLAYLFIPAT LITGSMLWLG ESDLTWRQWH
FYSVLGLLIY ILLHGYIYFL QLGKTLLSAL FSRQMLTLNA SLFIALFGLA VTAIWALTSN
LAPHKLTALN INPQTHIDID GKALEPFWKQ APKITLITDG GANFVDGQTP VSIQVAANET
ESYFLFRWRD TTHSLEHLPL EKQQSRWWVL QQGFHRFDEQ KFYEDKFAVM LSSSCGQGGD
GTVHLGPKPL ADKPANWHGK GYHASTDGRV RDIWHWKAVR TNDMFQADDN AFTPPLASRS
GERRYTAGYH ADGKESGAYV ANWSWYSKQS VEPKRLPLHE NTSKHLLAWF DSEPYQANKD
NYPEGARLPS TLYRSNRFEG DRADVRARAV WHQGFWTLEL ARKHDTGSEL DVKLTTGTCV
WVAAFDSAQI AHTRHQRPIK LNYLSR