| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4620 |
|---|
| Symbol | |
|---|
| ID | 6118986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5590918 |
|---|
| End bp | 5591565 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641636191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762965 |
|---|
| Protein GI | 170728939 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.560783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ATATTTTAAT GGCCATCGTT TCCACCAGCC TTCTGTTAAG CGGCTGTCAA
AGTGCCTACT ATGGGGCTAT GGAAAAAGTG GGTTACCACA AGCGCGATAT TATGGTCGAC
AGAGTCACTG ACGCTAAAGA GTCTCAAGAG GAAGCACAGG AGCAGTTCAG CTCAGCTTTA
GAGGAGATGC AGGCACTATT GAATCACGAT GGTGGTGACT TAGAAAAAGC CTACAACAAG
GCGAAAGATG AATATGAATC ATCACAGGAT GCGGCCGATG ATGTTAGTAA CCGTATTGAA
AAAGTAGAAG ATGTCGCCGA TGCCCTATTC GATGAGTGGC AAACAGAGAT AGGCGAGATA
AGTAAAGCCA GCCTACGCCG CAACAGTGAA TCTAAGCTTC GTGAAACTAA ACGCTCCTAT
GAGCAGTTAG TCCGCACCAT GAAGCGTGCA GAAGGCAAGA TGGCGCCAGT GTTAACAGCC
ATGAAAGACA ATATGCTCTA CCTAAAGCAC AACCTCAATG CTCAAGCCAT AGGCGCAATT
AAAGGCGAAT TTGCCAGCCT ACAAACCGAT ATTACAGGCT TAATCAAAGA GATGAATAAA
TCTATCGATG AGTCGACTAA GTTTATTGCT TCTATAGAGG GTAAGTAA
|
|---|
| Protein sequence | MKKHILMAIV STSLLLSGCQ SAYYGAMEKV GYHKRDIMVD RVTDAKESQE EAQEQFSSAL
EEMQALLNHD GGDLEKAYNK AKDEYESSQD AADDVSNRIE KVEDVADALF DEWQTEIGEI
SKASLRRNSE SKLRETKRSY EQLVRTMKRA EGKMAPVLTA MKDNMLYLKH NLNAQAIGAI
KGEFASLQTD ITGLIKEMNK SIDESTKFIA SIEGK
|
|---|
| |