Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4604 |
Symbol | |
ID | 6118970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5576199 |
End bp | 5577011 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641636175 |
Product | hypothetical protein |
Protein accession | YP_001762949 |
Protein GI | 170728923 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0889286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCAG CTTTTCGACC GCAACAGATA ACAAACAGGC TGACAGGGCT TAAGCTAAAC ACAACTTTGC TTATCACCTT GTTAGCAGTG CTCTGTGTTC AAACGGTACA ATCTGCCTCA TTTGATGCTC TTTTTGAATC AAGAGCTGAC AATCAGCAGC TGGAAAAGCT AACGGATAGA CTCGAGCTTG GTGAGAATGC CCAGGGGAAA TTTACTCAAT ATCGCCAACT TAAAGTACTT AAAAAGCCCC TAATCAGTCA TGGACAGTTT GCATTTGATT CAAGTTTGGG ATTGGTATGG CAGCAGACTA GGCCATTTCC TTCGACATTA GTACTCAAGG ATGGCGAGCT AATACAGATA GATAGCTCAG GTAATCGCCA AATTACTAAG GCCAGTGAAA GTCAGGGAGC TGGCGCCTTG GCTGAAACCA TGCCCAAGCT ATTAAAAGCA CTGTTAAGCG GTGAAATAAC AGCCCTAAAT GATCAATTTA ATCTCTATCT AATACACTCC AAAGAGTCTA CCACCAGCAG CTCCTTGCAG GTCAATGGCT GGCAGTTAGG CTTAGTGCCA AAAGATCCTT TAATGCTCAA AGTGATCCCT CAAATGGTAC TTCAGGGGGA AAATCAGCTA CGCAGCTTAA CCCTGCTTAG TAGCAATGGT GATACCAGTC GCATCGAATT TGAACAGATA AATAGCGATC CTTTAGATGA GGAGATGAAG CAGCTTATCT CTCCACAATC AGTAATGGAA CAAGCTAAGC CACTAGCATC ACAAGATGGT CTACCAGAGC CAAAACCTAA GCAGAAACCA TGA
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Protein sequence | MISAFRPQQI TNRLTGLKLN TTLLITLLAV LCVQTVQSAS FDALFESRAD NQQLEKLTDR LELGENAQGK FTQYRQLKVL KKPLISHGQF AFDSSLGLVW QQTRPFPSTL VLKDGELIQI DSSGNRQITK ASESQGAGAL AETMPKLLKA LLSGEITALN DQFNLYLIHS KESTTSSSLQ VNGWQLGLVP KDPLMLKVIP QMVLQGENQL RSLTLLSSNG DTSRIEFEQI NSDPLDEEMK QLISPQSVME QAKPLASQDG LPEPKPKQKP
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