Gene Swoo_4604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4604 
Symbol 
ID6118970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5576199 
End bp5577011 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content44% 
IMG OID641636175 
Producthypothetical protein 
Protein accessionYP_001762949 
Protein GI170728923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0889286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAG CTTTTCGACC GCAACAGATA ACAAACAGGC TGACAGGGCT TAAGCTAAAC 
ACAACTTTGC TTATCACCTT GTTAGCAGTG CTCTGTGTTC AAACGGTACA ATCTGCCTCA
TTTGATGCTC TTTTTGAATC AAGAGCTGAC AATCAGCAGC TGGAAAAGCT AACGGATAGA
CTCGAGCTTG GTGAGAATGC CCAGGGGAAA TTTACTCAAT ATCGCCAACT TAAAGTACTT
AAAAAGCCCC TAATCAGTCA TGGACAGTTT GCATTTGATT CAAGTTTGGG ATTGGTATGG
CAGCAGACTA GGCCATTTCC TTCGACATTA GTACTCAAGG ATGGCGAGCT AATACAGATA
GATAGCTCAG GTAATCGCCA AATTACTAAG GCCAGTGAAA GTCAGGGAGC TGGCGCCTTG
GCTGAAACCA TGCCCAAGCT ATTAAAAGCA CTGTTAAGCG GTGAAATAAC AGCCCTAAAT
GATCAATTTA ATCTCTATCT AATACACTCC AAAGAGTCTA CCACCAGCAG CTCCTTGCAG
GTCAATGGCT GGCAGTTAGG CTTAGTGCCA AAAGATCCTT TAATGCTCAA AGTGATCCCT
CAAATGGTAC TTCAGGGGGA AAATCAGCTA CGCAGCTTAA CCCTGCTTAG TAGCAATGGT
GATACCAGTC GCATCGAATT TGAACAGATA AATAGCGATC CTTTAGATGA GGAGATGAAG
CAGCTTATCT CTCCACAATC AGTAATGGAA CAAGCTAAGC CACTAGCATC ACAAGATGGT
CTACCAGAGC CAAAACCTAA GCAGAAACCA TGA
 
Protein sequence
MISAFRPQQI TNRLTGLKLN TTLLITLLAV LCVQTVQSAS FDALFESRAD NQQLEKLTDR 
LELGENAQGK FTQYRQLKVL KKPLISHGQF AFDSSLGLVW QQTRPFPSTL VLKDGELIQI
DSSGNRQITK ASESQGAGAL AETMPKLLKA LLSGEITALN DQFNLYLIHS KESTTSSSLQ
VNGWQLGLVP KDPLMLKVIP QMVLQGENQL RSLTLLSSNG DTSRIEFEQI NSDPLDEEMK
QLISPQSVME QAKPLASQDG LPEPKPKQKP