| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4602 |
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| Symbol | |
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| ID | 6118968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5574179 |
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| End bp | 5575741 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636173 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001762947 |
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| Protein GI | 170728921 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0136159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGA CGAACCAATC AAGCTCAAAG GATATGATTG TCCACTTTGG CCATAGGGCA
TTAAGCCTAG AAGATGTGGT TGCTGTTGCT AAGGGCGCTA AAGCAAAGCT TAAAGAGAGC
AGTGATTATC AAAGCTATAT TCAAAAAGGC GCAGACTTTA TCGATAGCCT GCTCAGCGAA
GAGGGCGTTG TTTATGGCGT CACCACAGGT TACGGCGATT CATGCACTGT CACTGTTGGG
CTCGATCTTG TCCATGAGTT GCCTTTGCAC CTCACCCGCT TTCATGGCTG CGGTTTAGGC
GAGATCCTCT CTCCGATGCA ATCACGTGCC GTTATGGCTT GCCGCTTAAG CTCACTAGCC
GTAGGTAAAT CTGGCGTAAG CTATGAGTTA CTACAAAGAA TTGAAACCTT ACTAAACCTC
AATATCACAC CTGTGATCCC CGAAGAGGGC TCAGTTGGCG CCAGCGGTGA CCTAACCCCA
CTCTCCTATC TAGCCGCAGT GTTAGTGGGC GAGCGTGATG TGATCTACCA AGGTAAACGT
CAGCCAACGG CGGATGTCTA TGCCGAGCTC AATATCACCC CATTAAAACT ACGCCCTAAA
GAGGGATTAG CTCTGATGAA TGGCACAGCT GTGATGACGG CACTTGCTTG TTTAGCCTAC
GACAGAGCCC AATATTTGAG TCGATTGGCT AGCCGAATCA CTGCCATGGC ATCGCTAGCC
TTAAAAGGTA ACTCAAATCA TTTCGATGAT ATCTTGTTTG CCGCTAAGCC CCATCCAGGA
CAAAACAAGA TTGCCGCTTG GATACGTGAA GATCTCAATC ACCACGAGCA CCCAAGAAAC
TCTGACAGAT TACAGGACAG ATATTCTATC CGCTGTGCAC CGCATATTAT CGGCGTGCTA
CAAGATGCGC TTCCCTTTAT GCGTCAGTTT ATTGAAACCG AGCTAAACAG TGCCAACGAT
AACCCCATCG TCGACGCCGA AGGGGAACAT ATCCTCCATG GCGGCCACTT CTATGGTGGT
CATATTGCAT TTGTAATGGA CTCGATGAAG AACACAGTTG CCAATATTGC CGACCTTATC
GATCGTCAGA TGGCATTAGT TATGGACCCT AAATTCAATA ACGGCCTTCC TGCGAACCTT
TCCGGTTCAA CTGGAGCAAG ACAAGCGATC AACCACGGCT TTAAAGCGGT GCAGATTGGC
GTCTCAGCAT GGACGGCTGA AGCATTAAAA AATACCATGC CTGCCAGTGT TTTCTCTCGC
TCTACTGAAT GTCATAACCA AGACAAGGTC AGCATGGGCA CCATAGCGGC TCGTGATTGT
ATGCGAGTAC TGCAACTGAC AGAGCAAGTT GCGGCTGCAG CGTTATTAGC CATGTCACAG
GGCATTAACC TGAGAATTGC ACAAGGTGAG TTATGCCAAT CATCACTGAC ACCTTCCGTT
GCTAAGACAT TAGAGCAGGT TAAAGTGGAT TTTGAACTAC TTACCGAAGA CAGACCCTTA
GAGCCGATTT TGAGACAAAC AGTCGATAAG ATCCAACAAG GCCAATGGGA AGTCTGCTCA
TGA
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| Protein sequence | MTQTNQSSSK DMIVHFGHRA LSLEDVVAVA KGAKAKLKES SDYQSYIQKG ADFIDSLLSE
EGVVYGVTTG YGDSCTVTVG LDLVHELPLH LTRFHGCGLG EILSPMQSRA VMACRLSSLA
VGKSGVSYEL LQRIETLLNL NITPVIPEEG SVGASGDLTP LSYLAAVLVG ERDVIYQGKR
QPTADVYAEL NITPLKLRPK EGLALMNGTA VMTALACLAY DRAQYLSRLA SRITAMASLA
LKGNSNHFDD ILFAAKPHPG QNKIAAWIRE DLNHHEHPRN SDRLQDRYSI RCAPHIIGVL
QDALPFMRQF IETELNSAND NPIVDAEGEH ILHGGHFYGG HIAFVMDSMK NTVANIADLI
DRQMALVMDP KFNNGLPANL SGSTGARQAI NHGFKAVQIG VSAWTAEALK NTMPASVFSR
STECHNQDKV SMGTIAARDC MRVLQLTEQV AAAALLAMSQ GINLRIAQGE LCQSSLTPSV
AKTLEQVKVD FELLTEDRPL EPILRQTVDK IQQGQWEVCS
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