Gene Swoo_4594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4594 
Symbol 
ID6118960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp5568086 
End bp5568814 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content48% 
IMG OID641636165 
Producthypothetical protein 
Protein accessionYP_001762939 
Protein GI170728913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000322165 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAATTAA CATTTAATAT ATGCTCTTGG GGAGCCTGGT CACCTCAATA TCAGCAGGCT 
GAAGATTGGA AGCACTGGCT TGAATCAGCC CCCATTCAAG AGGAACTCCC TCACTCTCCT 
AAGTTAGCTC AAGTCCCCGC AATGCAGCGT AGACGTTATA GCAAGCTAAC TAAGATGCAA 
TTGGAAGCCG CGTTTCAATG TGATGCCCCG ACCCCATGTC GCTCTATTTT TGCCTCAAGA 
CATGGCGAGC TCAATCGAAC CTTAGGCTTA CTCGATAATC TGGTAGAGCA GGAACCACTC 
TCACCCACGG CATTTAGTCA ATCAGTGCAT AACACAGCAA GTGGGATCTA CAGTATTTTA 
AAGGGAGATC AATCCTCCTC TACATCCATT GCAGCCAGCG AAGAGACCCT GTTGCAATCC 
TTTATTGAAG CCTATGGGCA ACTGCATCAA GACCCCGCGC CACTTATGCT CGTTTTTGGC 
GATGAGCCCG TACCTGAGAT CTACTCCCAA TTTACCGATG AAACAGGTCT TCCAGTCTCC 
ATGGCGTTTG TCTTAAGCCC AATCAATAAC GCGAGCAGTA ACGCCACACT CAGCATAAGC 
TATTGTGATA ATGAGGCATT GGCTTCAACT CAGGCCTTGA GCTATGGCGC CCTTCTCCAT 
GGCTTAGCTA ACCAGAGAAA CGTCTCAGGT ACACTATCTA ACCATCTGTG GAAGCTTAGT 
TTTGAATGA
 
Protein sequence
MQLTFNICSW GAWSPQYQQA EDWKHWLESA PIQEELPHSP KLAQVPAMQR RRYSKLTKMQ 
LEAAFQCDAP TPCRSIFASR HGELNRTLGL LDNLVEQEPL SPTAFSQSVH NTASGIYSIL 
KGDQSSSTSI AASEETLLQS FIEAYGQLHQ DPAPLMLVFG DEPVPEIYSQ FTDETGLPVS 
MAFVLSPINN ASSNATLSIS YCDNEALAST QALSYGALLH GLANQRNVSG TLSNHLWKLS 
FE