| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4588 |
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| Symbol | |
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| ID | 6118954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5561042 |
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| End bp | 5561974 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636159 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001762933 |
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| Protein GI | 170728907 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.902154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000219309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTTAATTT TACTCGCTAT TGTCGGTGGC TTTGTCATCC TAACTTTAGG AGCAGAAGCA
CTAGTTCGTG GTGCTAGTGC TATCGCCCTA AGGCTTGGAA TTGCCCCGCT TATCATTGGC
TTAACTATTG TAGCTTTCGG TACAAGTGCA CCAGAATTGG CCGTTAGTTT AAAATCGGCA
ATTGCAGGTA ACAGCGGTAT TGCACTGGGT AATGTCATAG GTTCAAACAT TGCCAATATT
GGCTTAATCT TGGCCATTAC AGCCTTGATC CGTCCAATAC AGGTTCAATC TCAGATGGTA
AAGCGTGATA TCCCAATTAT GATCGCAGCT TCGATGCTGT TCTGGGGACT TCTGCTCGAT
GGTCAATTGA GCTTCTGGGA CGGTGCATTA CTGACAACAC TGCTAGTGTG TTACCTCAGC
TTTAGTTACT TCAGTAGTAA AAACAGCAAT GATGGTGAGG AGTTAGATAC GAGTCCACAA
CACCCTATGC TATCGGTACT GTTTATCATA GCTGGTATTA GCATGTTAGT TGGCGGCGGC
ATACTCTTCG TCGATGGCGC CGTAGACTTA GCAAAAACCT TTGGGATCAG CGAAGTCATT
ATCGGCTTAA CGATTGTTGC TATCGGTACT AGCATGCCTG AACTTGTTAC CTCTATTGTT
GCGGCTCGCA AAGGGGAGAG CGATATCGCC ATAGGCAATA TCGTTGGCTC TAACCTGTTT
AACATTTTAG GCATATTGGG TATTACAGCC CTTATTCACC CTATCGCAGC GGCAGGCATT
CAAGACTTTG ATCTGCTTGT GATGTTACTA CTGGCACTAA TAGTCCTTCC CTTTGCCTGG
ACCGGATTTA GAATTGGTAG ACGTGAAGGC GGGATCCTTT TACTGGGTTA CCTCTCCTAC
ATTAGTTATC TGGTCGTTCA GGCTTCAGCC TAA
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| Protein sequence | MLILLAIVGG FVILTLGAEA LVRGASAIAL RLGIAPLIIG LTIVAFGTSA PELAVSLKSA
IAGNSGIALG NVIGSNIANI GLILAITALI RPIQVQSQMV KRDIPIMIAA SMLFWGLLLD
GQLSFWDGAL LTTLLVCYLS FSYFSSKNSN DGEELDTSPQ HPMLSVLFII AGISMLVGGG
ILFVDGAVDL AKTFGISEVI IGLTIVAIGT SMPELVTSIV AARKGESDIA IGNIVGSNLF
NILGILGITA LIHPIAAAGI QDFDLLVMLL LALIVLPFAW TGFRIGRREG GILLLGYLSY
ISYLVVQASA
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