Gene Swoo_4581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4581 
Symbolgmk 
ID6118947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand+ 
Start bp5552785 
End bp5553408 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID641636152 
Productguanylate kinase 
Protein accessionYP_001762926 
Protein GI170728900 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.877029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones0 
Fosmid unclonability p-value0.0000000250462 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCGCAC GCGGAAACCT ATTTATCGTA TCGGCGCCAA GTGGCGCGGG TAAATCATCA 
CTCATCTCCG GACTGCTAAA AGACAAGCCG GCAGATAAGC AGGTATCGGT TTCTCATACG 
ACCCGACAAC CGCGTCCTGG TGAAGTTAAT GGCCAACATT ACCACTTTGT CAGCGTTGAG 
GAGTTTAAGG CGTTAATCGC CGAAAATGCC TTTTTCGAAT GGGCAGAGGT GTTCGGTAAC 
TATTATGGCA CCTCACGTAA AGTCATTGAA CAGACGCTAG AGCAAGGTAT CGATGTATTC 
CTCGATATTG ACTGGCAAGG AGCTCAACAG GTCAAGAAAG TGATGCCTGA AGCGATCGGG 
ATCTTCATTC TTCCCCCATC AAAAGCTGAG CTTGAGAGAC GCTTAACTGG CCGCGGCCAA 
GATAGCGCAG AGGTGATTGC TGGGCGTATG GCTCAAGCCG CTTCAGAGAT ATCTCACTAT 
GATGAGTATG ATTTCATCAT TATTAACGAT GATTTTGATA CCGCACTTGG TGATTTTATC 
GCTATAATTC GCAGTCAACG CTTAACTGGC GCTGGTCAAA TTCATACTCA CAATGATATG 
CTTAATGATC TATTGGCAGA ATAA
 
Protein sequence
MTARGNLFIV SAPSGAGKSS LISGLLKDKP ADKQVSVSHT TRQPRPGEVN GQHYHFVSVE 
EFKALIAENA FFEWAEVFGN YYGTSRKVIE QTLEQGIDVF LDIDWQGAQQ VKKVMPEAIG 
IFILPPSKAE LERRLTGRGQ DSAEVIAGRM AQAASEISHY DEYDFIIIND DFDTALGDFI 
AIIRSQRLTG AGQIHTHNDM LNDLLAE