Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4581 |
Symbol | gmk |
ID | 6118947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5552785 |
End bp | 5553408 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636152 |
Product | guanylate kinase |
Protein accession | YP_001762926 |
Protein GI | 170728900 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.877029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000250462 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACCGCAC GCGGAAACCT ATTTATCGTA TCGGCGCCAA GTGGCGCGGG TAAATCATCA CTCATCTCCG GACTGCTAAA AGACAAGCCG GCAGATAAGC AGGTATCGGT TTCTCATACG ACCCGACAAC CGCGTCCTGG TGAAGTTAAT GGCCAACATT ACCACTTTGT CAGCGTTGAG GAGTTTAAGG CGTTAATCGC CGAAAATGCC TTTTTCGAAT GGGCAGAGGT GTTCGGTAAC TATTATGGCA CCTCACGTAA AGTCATTGAA CAGACGCTAG AGCAAGGTAT CGATGTATTC CTCGATATTG ACTGGCAAGG AGCTCAACAG GTCAAGAAAG TGATGCCTGA AGCGATCGGG ATCTTCATTC TTCCCCCATC AAAAGCTGAG CTTGAGAGAC GCTTAACTGG CCGCGGCCAA GATAGCGCAG AGGTGATTGC TGGGCGTATG GCTCAAGCCG CTTCAGAGAT ATCTCACTAT GATGAGTATG ATTTCATCAT TATTAACGAT GATTTTGATA CCGCACTTGG TGATTTTATC GCTATAATTC GCAGTCAACG CTTAACTGGC GCTGGTCAAA TTCATACTCA CAATGATATG CTTAATGATC TATTGGCAGA ATAA
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Protein sequence | MTARGNLFIV SAPSGAGKSS LISGLLKDKP ADKQVSVSHT TRQPRPGEVN GQHYHFVSVE EFKALIAENA FFEWAEVFGN YYGTSRKVIE QTLEQGIDVF LDIDWQGAQQ VKKVMPEAIG IFILPPSKAE LERRLTGRGQ DSAEVIAGRM AQAASEISHY DEYDFIIIND DFDTALGDFI AIIRSQRLTG AGQIHTHNDM LNDLLAE
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