Gene Swoo_4579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4579 
Symbol 
ID6118945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5550106 
End bp5551065 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content46% 
IMG OID641636150 
Producthypothetical protein 
Protein accessionYP_001762924 
Protein GI170728898 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000316379 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACAACAG ATTGTGAAAA TGAAGCGCTA ACTTTAGTAA TTATGGCTGC TGGGTTAGGC 
AGTCGTTTCG GCGGTGATAA GCAGTTAGCA GCGCTAGGAC CTAATGATGA AACTATGTTG
GAGCTCGCTA TTGTATCCGC TTGTCGAGCT GGCTTCTCTG GCGTAGTGTT AGTGATAAGG
CCTGAGCTAG AGTCTGATAT CGAAGCGCTT TTTAATGACA GCTTAAATGA TAAACTTGAT
GCAGGCTTTA GCCATGATTT TTGTTATCAG GCTATGGACG ACTTACCTGA GGTTGCATTA
GCTCATCTTT CCGATGTTAA CCATAGGGAA AAACCTTGGG GAACGGCGCA TGCACTTTGG
AGTGCGCGTA AGAAAGTCAA AGGTCGAATG GCGGTGATTA ATGCCGATGA TTACTATGGT
GACACGGCTT TTGAACTGCT TGCATCTGGG CTGAATGAGT CAAAAGAGGA TTGGATGCTG
GTTGCTTATC CCCTTAGCTT GACTCTCTCT GAGCATGGCG GGGTTAATCG AGGTGTGTGC
CTAGTCAAAG AGGGACTACT TCAGAGTGTC GCAGAATGGA CCGATATTCG TCAGAGCTCT
GATGAGGGGT TAGTTGGAAC CTCTAAAGGA GAGCGGGGAG TCTTGTCGCC TTCAGTGCCC
GTCTCTATGA CCTGCTGGGG ATTCACCCAA GATATTTTTT TAGCGATTGA AGCGGAATTA
ATACAGTTTA TTTCCGTTTA TGGTCAGGAG GCCAAATCTG AGTGCTTTCT CCCAGATGTG
GTTCAGCATA GTATGTCTAA AGCGGCATTA ATAAATAATT TGCCTGACGC TAAGCGTGTC
AGAGTTAAGA CGGCTCAGGA GCCTTGGTTT GGTGTGACCT ACCCTCAGGA TGCAGTGTGG
GTAAGACAGA AACTGTCTAA GCTATTAAAT AATAAGAGTA ATGGAGTTAT TAGTGATTGA
 
Protein sequence
MTTDCENEAL TLVIMAAGLG SRFGGDKQLA ALGPNDETML ELAIVSACRA GFSGVVLVIR 
PELESDIEAL FNDSLNDKLD AGFSHDFCYQ AMDDLPEVAL AHLSDVNHRE KPWGTAHALW
SARKKVKGRM AVINADDYYG DTAFELLASG LNESKEDWML VAYPLSLTLS EHGGVNRGVC
LVKEGLLQSV AEWTDIRQSS DEGLVGTSKG ERGVLSPSVP VSMTCWGFTQ DIFLAIEAEL
IQFISVYGQE AKSECFLPDV VQHSMSKAAL INNLPDAKRV RVKTAQEPWF GVTYPQDAVW
VRQKLSKLLN NKSNGVISD