| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4573 |
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| Symbol | |
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| ID | 6118939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5542356 |
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| End bp | 5543612 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641636144 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001762918 |
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| Protein GI | 170728892 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000280036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCAAAC AAATAGAACA AGTTGAAGGG TTGAATATTC AGCTACACGG TATCGATATT
GGCGTTGTTG CTCATTATGC TGGTGGGAAG AACATACTTA GTTTTAACCC TGTATATATT
GCAATGTGTC AGCATGAGCG ACCAGTGCTG ACACTTAGGC AGCTTCAAGA TCCTAATTAT
TTTAATAAGC CTCAAATCCG CAGTGAAAAG ATCCCCCCTG TATTATCGAA TTTATTACCA
GAGGGGATCT TAAGAGAGAT TGTGGCGAAA GCGCTTCAAT GTCACGTGAA TAATGAGTTC
TCGATTTTGG CCTATTTAGG GACTAATTTA CCAGGTGCAT TAGTGGCGTT GCCAATTAAG
GCGGGAGATA TGCCCAGTTG GGCATTAGAG CAACGTTTAG TTACTGAGCC ACAGCAGATT
AACGTTAAAC ATGCAGATAC TAAATTCTCA CTTGCTGGTG TGCAGATGAA ATTCTCATCT
TCTCATGTAG ATGGGCACTA TCACATTGAT CAGGAAATCT CTGAAGATAT GTGGATTATT
AAAACGCCTT CAACGGTGCA TAAAGGTGTG TCTGTTAATG AGTATACCTG TATGAGGTTA
GCCGAAGCCG CTGGTGCTAA TATTCCAGAG ATACGTTTGA TTAAACTCGA TGAATTAGAA
GGCCTACCGA ATATCAGGCT CCCCGATGAA ACATATGCTT ATGGTATAAA GCGTTTTGAT
CGTACTCATG AAGGACGAGT GCATACTGAA GATTTTGCTC AGATCTTCGG CTTATACCCT
TCAGATAAAT ATCAGAAAGT TAATTATGAA CAGCTAGGGC AGGTGTTATT TCGTACTAGT
AATGATCGCT TAGATGATGT GCAGCAAATG GCGAGAAGAT TACTGATTAA TATACTGTTG
GGTAATGGCG ATGCTCATTT AAAGAACTGG ACCATTATCT ACCAAGATCA GCGTTCTCCT
CGCTTGTCGC CGCTCTATGA TGTGGTGTTC ACAGCCCCAT ATATTGAGCA TGATAACCTT
GCTTTGAATA TGACAAAATC TAAGCAGTGG TATGAAATGA CAATGGAGCA TTTTGAAAAT
TGGTCAAATA GTGTAGGTGT TCCATGGGTA GCAATTAAAC CACATCTTTT AGATACGATG
GAGAAGGCTC GCTCTATGTG GCCTGAGATG CTTGAAGAAC TGCCAATGCT GAATGAGCAT
AAAGAAGCTT TGCAAAACCA TTGGCAAAGA TTATCACCAG ATTTTCGGAT TGATTAG
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| Protein sequence | MSKQIEQVEG LNIQLHGIDI GVVAHYAGGK NILSFNPVYI AMCQHERPVL TLRQLQDPNY
FNKPQIRSEK IPPVLSNLLP EGILREIVAK ALQCHVNNEF SILAYLGTNL PGALVALPIK
AGDMPSWALE QRLVTEPQQI NVKHADTKFS LAGVQMKFSS SHVDGHYHID QEISEDMWII
KTPSTVHKGV SVNEYTCMRL AEAAGANIPE IRLIKLDELE GLPNIRLPDE TYAYGIKRFD
RTHEGRVHTE DFAQIFGLYP SDKYQKVNYE QLGQVLFRTS NDRLDDVQQM ARRLLINILL
GNGDAHLKNW TIIYQDQRSP RLSPLYDVVF TAPYIEHDNL ALNMTKSKQW YEMTMEHFEN
WSNSVGVPWV AIKPHLLDTM EKARSMWPEM LEELPMLNEH KEALQNHWQR LSPDFRID
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