Gene Swoo_4572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4572 
Symbol 
ID6118938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5541796 
End bp5542185 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content51% 
IMG OID641636143 
Producthypothetical protein 
Protein accessionYP_001762917 
Protein GI170728891 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000166313 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTACAAA CCCGTCTCGA CGCCATCGTT GAGCAAGTGG CTATCGTCCG TGAACATATG 
CCAACCGTCA TGCAATGGCA ACGTGACAAG CTCACCAATC GTCTAGCTGA GATAACAGGT
GAACTCGATC CAGCCCGCCT TGAGCAAGAG ATGGTTATCC TAGCGCAGAA GATGGATGTT
GCCGAAGAGA TGGATAGGCT CGATGCCCAT GTCGCCGAAA CACAACGCAT CCTCAAAAAA
GGTGGCGCAC AAGGCCGCCG ACTCGACTTT ATGATGCAAG AGTTTAACCG CGAATCAAAC
ACTCTAGCGT CTAAGTCAAT CAGTAGCGAC GTCACCGCAG CAGCGGTAGA GCTTAAAGTG
CTAATTGAGC AGATCCAGAA CGTAGAATAA
 
Protein sequence
MLQTRLDAIV EQVAIVREHM PTVMQWQRDK LTNRLAEITG ELDPARLEQE MVILAQKMDV 
AEEMDRLDAH VAETQRILKK GGAQGRRLDF MMQEFNRESN TLASKSISSD VTAAAVELKV
LIEQIQNVE