| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4571 |
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| Symbol | |
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| ID | 6118937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5540461 |
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| End bp | 5541768 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641636142 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001762916 |
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| Protein GI | 170728890 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000268892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGTGGTT CTAACTTTCA CACACTTGAG ATGCACTTTA GAGGCAGGGT TATTGGGACG
ATAGGTTTTG ACATAGACAC TGAACGATTC TCTATCGAAT ACACTAAAGC TTGGCAGGAA
AATGGTTTTC CTATTTCACC AAAGCTCCCA CTTGATGGCC AAGCTAATAG TTCTCAAATT
TCCATTTATC TGACTAACCT ACTGCCCGAA AATAAAGGGC TTGATCACCT TATTGAAGCC
CTAGGTATTG CCAAAAGTAA TACATTTGCT TTGATCAAAA GCATTGGATT CGATACCTCA
GGTGCAATAT TGTATCTGCC TGTGGCCACC AAGCCACCAG TAACCTCTTT TACCCCAATT
AGTAAAGCAG ATCTTATCAA GCGAATCGAA GATCCTGAAC ATTGGCCGAT GGAAGTCTGG
GACGGAAAAC CACGCCTTTC CGTTGCAGGG GTTCAATCAA AATTAAACCT GTTCCACACC
GACACAGAAT ACGGATTTGG TGAAGGTGAG CTGTGTTCAA CCCACATCAT TAAATTTGAA
AAAAGCAATC AGCAGCACCT CGTACTCAAC GAATTTATGA CCATGACACT TGCCGACCTC
ATTGGTATGC AGGTGGCCAA AGTAGAGATA TTGCCAATAG GGAAATACAA AGCGTTATCC
GTCACCCGCT TCGATCGCAT GTACGATCCT GAGCGTCATA TTGTAATGCG TCGTCATCAG
ATCGATGCAT GTCAAGCTCT GGGCTTTTCC GTCGCAAGAA AGTATGAACG ATATCTTGGT
AGTGGTCGTG ACGTACGAGA CATCCGTGAA GGAGTAAGCC TAGAAAAACT GTTTAGTATC
GCAGAGCACT GCGCTAACCC TGCACAAGCC AAGTTTGACA TGCTTCGCTG GACAATCTTT
AACTTACTCG TCTGCAATGC GGATTCACAT GGCAAAAACT ATTCATTCTA TGTCACTCCG
AATGGGCTTG AACCGACCCC ATGGTATGAT CTTGTCAACG TGCAGATGTA CCCTGATTTT
GATCAAGAGC TTGCTATGGC TATTGGGGAT GAGTTCGAGG CTGATAAGAT CCACGCCTAC
CAATTAATGA CATTTGCTGA AGAGTGCGGC ATTAAGCAAA ACATACTTGA ATTAACCCTC
AAGCAACTAG CGAAAGCAAT TATCGGTAAC CTGGATAAAG CGGCAAACCA AGCTGGGGAG
CTTACGGATG CAGAATCCGA GTATGTTGGA GCTTACAAAG CAACGATTCA AGCACGATGT
GAATACTACC TAACTCAGGT TGAAGAAATG AAGCACATTG AGCTATAG
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| Protein sequence | MSGSNFHTLE MHFRGRVIGT IGFDIDTERF SIEYTKAWQE NGFPISPKLP LDGQANSSQI
SIYLTNLLPE NKGLDHLIEA LGIAKSNTFA LIKSIGFDTS GAILYLPVAT KPPVTSFTPI
SKADLIKRIE DPEHWPMEVW DGKPRLSVAG VQSKLNLFHT DTEYGFGEGE LCSTHIIKFE
KSNQQHLVLN EFMTMTLADL IGMQVAKVEI LPIGKYKALS VTRFDRMYDP ERHIVMRRHQ
IDACQALGFS VARKYERYLG SGRDVRDIRE GVSLEKLFSI AEHCANPAQA KFDMLRWTIF
NLLVCNADSH GKNYSFYVTP NGLEPTPWYD LVNVQMYPDF DQELAMAIGD EFEADKIHAY
QLMTFAEECG IKQNILELTL KQLAKAIIGN LDKAANQAGE LTDAESEYVG AYKATIQARC
EYYLTQVEEM KHIEL
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