Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4568 |
Symbol | rph |
ID | 6118934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5538084 |
End bp | 5538797 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641636139 |
Product | ribonuclease PH |
Protein accession | YP_001762913 |
Protein GI | 170728887 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000188043 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGCCCAA ATGACAGAAC GCCAGCACAA TCTCGCCCAG TGACAATTAC ACGTCAGTTT ACAGCCCATG CTGAAGGCTC TGTTTTGGTA GAGTTTGGCG AAACTAAAGT GCTGTGTACT GCAAGTTTCA CCGAAGGGGT GCCACGTTTT CTAAAAGGAA AAGGCCAAGG TTGGGTAACG GCTGAATATG GCATGTTGCC TCGTTCTACT CATAGCCGCA TGGATCGTGA AGCGGCTCGC GGTAAGCAGT CTGGCCGTAC TCAAGAGATC CAACGTCTTA TTGGTCGCTC TCTTCGTGCA GCTGTGGATA TGAAGGCACT TGGTGAAAAT ACCATAGTGA TCGATTGTGA TGTGATTCAA GCCGATGGCG GTACGCGTAC TGCAGCGATT ACAGGTGCCT GCGTTGCGCT AGTTGATGCG CTAAACTGGG CTCGTGGCAA AGGTATTTTG AAGAATAACC CACTTAAGTT CCTGATTGCC GCGGTTAGTG TTGGTATCTA TAAAGGTGAG CCTATCTGTG ATCTCGAATA TATCGAAGAT AGTGAAGCTG AAACCGATAT GAATGTCGTG ATGACAGAAA CTGGCAAGAT GATCGAGATT CAAGGTACCG CTGAAGGTGA GCCGTTTAGC CATGAAGAGC TTCTTAGCTT GCTTGAGCTG GCTAAGCACG GTATTCGTGA GATTGTTGAT GTACAGAAAG CTGCATTGAG CTAA
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Protein sequence | MRPNDRTPAQ SRPVTITRQF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGKGQGWVT AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRSLRA AVDMKALGEN TIVIDCDVIQ ADGGTRTAAI TGACVALVDA LNWARGKGIL KNNPLKFLIA AVSVGIYKGE PICDLEYIED SEAETDMNVV MTETGKMIEI QGTAEGEPFS HEELLSLLEL AKHGIREIVD VQKAALS
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