| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4560 |
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| Symbol | rpmB |
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| ID | 6118926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5530378 |
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| End bp | 5530614 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641636131 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_001762905 |
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| Protein GI | 170728879 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00191213 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000496067 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAAGAG TATGCCAAGT AACTGGCAAG AAACCAATGG TTGGTAACAA CCGCTCACAC
GCGAAAAACG CGACACGTCG TCGTTTTTTA CCTAACCTAC AAAATCACCG TTTTTGGTTA
GAAGGTGAAA AGCGTTTCGT TAAGCTACGT ATCTCTACTA AAGGTATGCG TATAATCGAT
AAGAAAGGTA TTGAAGTTGT TGTTGCTGAA CTTCGTGCCC GTGGCGAGAA GGTATAA
|
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| Protein sequence | MSRVCQVTGK KPMVGNNRSH AKNATRRRFL PNLQNHRFWL EGEKRFVKLR ISTKGMRIID
KKGIEVVVAE LRARGEKV
|
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| |