| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4550 |
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| Symbol | |
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| ID | 6118916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5516103 |
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| End bp | 5517674 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636121 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001762895 |
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| Protein GI | 170728869 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.518555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0133708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACC GAGTGATTAT TTTTGATACA ACCCTACGTG ATGGGGAGCA AGCCCTAGCG
GCCAGTTTGA CGGTTAAGGA AAAACTACAG ATAGCACTCT CATTGGAGCG TTTAGGTGTC
GATGTGATGG AGGTGGGCTT TCCTGTTTCC TCCCCTGGCG ATTTTAAATC TGTAGAGACA
ATCGCACGAA CGGTAAAAAA CAGCCGAGTG TGTGCATTAG CCAGAGCCCT TGAAAAAGAT
ATCGATGCCG CAGCGCAATC TTTATCTGTG GCTGATCAGT TCCGTATTCA TACCTTTATC
TCAACCTCGA CGATTCACGT TGAAAGCAAA CTAAAACGCT CTTTCGATCA AGTACTGGAG
ATGGCTGTCG GTGCGGTTAA GTATGCTCGT CGCTTTACTG ATGATGTAGA GTTTTCCTGT
GAAGATGCGG GGCGTACGCC AATTGATAAT TTGTGCCGTA TGGTTGAGGA GGCGATCAAG
GCTGGCGCTA AGACAATTAA TATTCCTGAC ACTGTGGGCT ACACAGTGCC GAGTGAGTTT
GGCGGCATCA TTGAAACCCT ATTTAACCGA GTGCCTAATA TCGATCAAGC GGTGATCTCC
GTTCATTGTC ATGATGATTT GGGCCTTTCG GTCGCGAACT CAATTACCGC AGTGCAGCAA
GGTGCACGTC AGATCGAGTG TACGGTTAAC GGTATTGGTG AGCGAGCGGG TAACTGTTCA
CTCGAAGAGA TCGCCATGAT CTTGTCGACC CGTAAAGCAG CACTTGGACT AGAGACTGGG
ATTAATGCTA AGGAGATCCA CCGTACCTCT AGCTTAGTCA GCCAACTTTG TAATATGCCT
GTACAGGCTA ATAAAGCTAT CGTGGGCGCG AATGCATTTA CTCACTCATC GGGTATCCAT
CAAGATGGCA TGCTGAAATC GCAAAATACC TACGAGATCA TGACACCTGA AAGTATCGGT
CTTCCACGTA ACAATTTGAA TATGACATCT CGCTCTGGTC GACATGTGAT TAAGCATCGC
ATGGAAGAGA TGGGCTATGG CGAGCATGAT TATGATATGG ACGTCTTGTA TGAATCTTTC
TTGAAACTTG CAGATAAGAA AGGCCAAGTA TTTGATTACG ATCTTGAAGC TTTAACCTTT
ATGGAAGCCC AAGCCGAAGA GGAGTCATTT TATCAACTTA AACAGTTAGT TGTGCACTCC
GATTCCACAC AGGGAAATGC AACTGCCACA GTGAAGATAG AGCTTGATGG TGAGGTGGTC
ACTGAGGCTG CTACAGGTAA TGGTCCTGTG GATGCCGCTT ATAATGCAAT TGCACGTGCT
AGCAAGTGTG AAATTAATAT CACTAGCTAC AAGCTAAGCG CTAAAGGTGA GGGGCAAGAC
GCCCTAGGTC AGGTGGATAT TGAGGCGAGT TATCAGCAGC AAAGTTTCCA CGGTGTTGGT
TTAGCGACCG ATGTGGTAGA AGCGTCGGTG CAGGCGCTCA TACATGTGAT GAACCTGACA
TGGCGTGCGG ATAAGGTTGC AGACTGTAAG CAAAAGATCC AGCAAAAAGC GAGATCTCTT
GGTGGCGTTT AA
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| Protein sequence | MSNRVIIFDT TLRDGEQALA ASLTVKEKLQ IALSLERLGV DVMEVGFPVS SPGDFKSVET
IARTVKNSRV CALARALEKD IDAAAQSLSV ADQFRIHTFI STSTIHVESK LKRSFDQVLE
MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEEAIK AGAKTINIPD TVGYTVPSEF
GGIIETLFNR VPNIDQAVIS VHCHDDLGLS VANSITAVQQ GARQIECTVN GIGERAGNCS
LEEIAMILST RKAALGLETG INAKEIHRTS SLVSQLCNMP VQANKAIVGA NAFTHSSGIH
QDGMLKSQNT YEIMTPESIG LPRNNLNMTS RSGRHVIKHR MEEMGYGEHD YDMDVLYESF
LKLADKKGQV FDYDLEALTF MEAQAEEESF YQLKQLVVHS DSTQGNATAT VKIELDGEVV
TEAATGNGPV DAAYNAIARA SKCEINITSY KLSAKGEGQD ALGQVDIEAS YQQQSFHGVG
LATDVVEASV QALIHVMNLT WRADKVADCK QKIQQKARSL GGV
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