Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4546 |
Symbol | |
ID | 6118912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5511111 |
End bp | 5512409 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636117 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_001762891 |
Protein GI | 170728865 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.495383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0136159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGC GCATTTTATC TGTGGCTGTG ATTGCAGCAA TCATGGGAAC AACGACTCAA GTTCAAGCGG CTGGTTTTCA ATTAGCTGAA TACTCTGCAA CAGGATTAGG CCGTGCCTAC GCCGGTGAAG CTGCTATGGC CGATAACGCG GCTGCACAAT TTCGTAACCC AGCCATGCTC ACCTACCTTC AAGGTACTCA AATGACCACT GGTGCGATTT TGGTTATGCC AAATATCGAT GTTGATGGTG AAGTGACCTA TGTCGACGGT AAAAACCCAA CATCGGCAAA GGACATTGCT GGTGATGCGG TTGTTCCCAA TTTTTATGTA TCACATCAGT TAAATGAGCA ATGGTTCTTA GGTGTTGCCT TAGGAAGCAA CTTTGGTATG GCGACAGAGC TTGATGATAG CTTTCGCGGC AACCAATTTG GTAATGAAGC TTCGGTGACA ACAGTAGAGC TTAACCCTAA TATTGCATAC CGTATCAATG ACCAGTTTAG TATCGGTGCT GGCGTTCGCT TTGTGATGGG TGAAGGCAGC TTCGGTGCCA AGAGCTCTGT TGATGTTCCA TTATCTGCAA GTCTCATTAT TCCTAAGGGA ACCACTCTAA AGTACATGGA AGGGGATGAT ACCTCTTGGG GATGGCAGCT AGGTGGTGCA TGGCAGATCA ATGCTAATAA CCGTATTGGC TTTAACTATC GTTCTGAGGT TGAGCAAAAC TTGGAAGGTG AAGCGAATGG CCTAGGTTTT AGCATGCTTG AAGGTAGCAT GAACGCGAGT AAAATCTATG CGGGTGCAAT GGAGCTTACG CTCCCAGCCA CAGCTGAGAT TGCCAGTTTC CACCAATTAA CGGATAAGCT TGCTGTTCAT GCCAGCGTGA ACTGGACTGA CTGGAGCTCA TTCGAAAAGC TTGAAGCTAA AATTCCTGAG CTAAGTAACT CTGCTATTTT GGTTAAAGAG GAAAACTGGA AAGATAACTA CCGTTTTGCA CTTGGTGCGA CTTATGAGTT GTCTGCAAAA TCAAGCCTAA GAGCTGGTGT TGCCTATGAT CAGGCCGCGG TTGATGATAT TCACCGTACG GCGACCATTC CTGAAGTTAA CCGTCTTTGG TTGAGTGCTG GTTATGGATA CCAATATAGC GAAAATTTAG CGTTTGATTT CGGGGCAACT TACATCTTTG CTGATGAGTC TCCAATGCAT GAGGCTGACA CTGATTCACT GCCGTTTGGT GGAGCGTTTG AGGGGCAAGT TAGTGGTAAT ATTATGCTAG TGGGTGTGCA GGCTAGCTAC CGTTTCTAA
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Protein sequence | MNKRILSVAV IAAIMGTTTQ VQAAGFQLAE YSATGLGRAY AGEAAMADNA AAQFRNPAML TYLQGTQMTT GAILVMPNID VDGEVTYVDG KNPTSAKDIA GDAVVPNFYV SHQLNEQWFL GVALGSNFGM ATELDDSFRG NQFGNEASVT TVELNPNIAY RINDQFSIGA GVRFVMGEGS FGAKSSVDVP LSASLIIPKG TTLKYMEGDD TSWGWQLGGA WQINANNRIG FNYRSEVEQN LEGEANGLGF SMLEGSMNAS KIYAGAMELT LPATAEIASF HQLTDKLAVH ASVNWTDWSS FEKLEAKIPE LSNSAILVKE ENWKDNYRFA LGATYELSAK SSLRAGVAYD QAAVDDIHRT ATIPEVNRLW LSAGYGYQYS ENLAFDFGAT YIFADESPMH EADTDSLPFG GAFEGQVSGN IMLVGVQASY RF
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