Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4538 |
Symbol | murE |
ID | 6118904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5502894 |
End bp | 5504402 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641636109 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_001762883 |
Protein GI | 170728857 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0149307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACTAA AAGATCTATT AGCACCTTGG TTCCATTACT CAGGATCTGA GAGTGTTAAC AAGTTGAGCC TTGATAGCCG TGAGGTAGAC CAAGGCGATC TGTTTGTTGC TGTGCCTGGT CATCAAGTTG ATGGTCGAGA TTACATTGAT GTGGCGGCAA AAAATGGTGC ACAAGTGTCA CTGGTGCATA CTGACAACCC CGAGATGCAC GGTAAGGTTT TGACTAGCAA CAGCACCCAG ATTTTTTTCT TTCAGCTAAG CCGTCAGCTC TCTGCTTTGG CTGCTCAGGC CTATCCACTG CCTGTTGAGC GTTTGAAATT AGTTGGTGTC ACAGGCACAA ATGGTAAAAC TTCTATTACG CAGCTTATGG CGCAACTGTT AGTTTGTTTA GGCAAACAGC CTGCTGTGAT GGGAACCTTA GGTAATGGAC TTTGGGGAGG GTTAGTCGAC AGTGGTAATA CAACCGCCGA CCCTATTACC ATCATGGCTC AACTTAACGC TTTTAATGAG CTGGGTGCAG ATCTGTGTGC AATGGAAGTA TCAAGCCATG GCCTGATACA GGCAAGAGTC GATGCGGTCC CCTTCGACTT GGCTATTTTT ACTAATTTAA GCCGAGATCA TCTTGATTAT CATGGCACTA TGCAGGCCTA TGGTGAGGCT AAGTTCAGGT TATTTAAGTT CCCCTCTCTA AAGTCAGGCG TTATCAACCT TGATGATGAT TTAGGTAAGC AGTGGTTGGC TCAAAGTGAT TCAGCCAAGC TGATTGGTTA TAGCATTGCT GGCGATAGTG ACACTGTTTC TCAAGATGCA GCTATTTATA CCAAAGGTAA CCATTTTCAT AATCAAGGTG TCAGAGCAAA GCTTGTATGG CCCGAAGGCT GCGGCAATAT TGACTCCCCT CTGCTAGGTG CATTTAACCT GTCAAACTTG CTTGCAGCTT TAGCGGGCCT TTATCAACTT GGTTTTGATA TGAATGCCCT GCTTAATGCC GTGCCAAAGC TGAATGCCGT TGCTGGACGA ATGGAGCAGT TTACTACTGA AAACGGTATC ACACTTGTGG TGGATTATGC CCATACTCCC GATGCTATTG AACAGGCACT TAAGGCGCTA AGAGGTCACT GTGAGGGTGA GCTGTGGTGT CTATTTGGTT GTGGCGGCGA TCGTGATAAA GGCAAGCGTC CTTTAATGGC GCAGTCTGCT GAAGCGTATG CCGACCGTAT TATGGTGACC AGTGATAATG CTAGAAGCGA GTCTCCAGAT GAGATAATTA ATGACGTATT GGCAGGGCTT AATCGCCCTG AACGTGCGGT TACACAAGTG GATCGTGAAC TGGCGATTAG AGAGGTGCTA GCCGCCGCTA AACCTGGCGA CCTTATTTTG CTGGCAGGTA AGGGGCATGA AACCTATCAA GAGGCCGGTG GTGTGCGACG TGATTATGAT GAACGTGCAT TAGCTCGCAG TTTAGCAAGT GGAAGTTTAG CTAATAATAG TTCTGAGGTA GATAGATGA
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Protein sequence | MLLKDLLAPW FHYSGSESVN KLSLDSREVD QGDLFVAVPG HQVDGRDYID VAAKNGAQVS LVHTDNPEMH GKVLTSNSTQ IFFFQLSRQL SALAAQAYPL PVERLKLVGV TGTNGKTSIT QLMAQLLVCL GKQPAVMGTL GNGLWGGLVD SGNTTADPIT IMAQLNAFNE LGADLCAMEV SSHGLIQARV DAVPFDLAIF TNLSRDHLDY HGTMQAYGEA KFRLFKFPSL KSGVINLDDD LGKQWLAQSD SAKLIGYSIA GDSDTVSQDA AIYTKGNHFH NQGVRAKLVW PEGCGNIDSP LLGAFNLSNL LAALAGLYQL GFDMNALLNA VPKLNAVAGR MEQFTTENGI TLVVDYAHTP DAIEQALKAL RGHCEGELWC LFGCGGDRDK GKRPLMAQSA EAYADRIMVT SDNARSESPD EIINDVLAGL NRPERAVTQV DRELAIREVL AAAKPGDLIL LAGKGHETYQ EAGGVRRDYD ERALARSLAS GSLANNSSEV DR
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