Gene Swoo_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4536 
SymbolmraY 
ID6118902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5500448 
End bp5501530 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content46% 
IMG OID641636107 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001762881 
Protein GI170728855 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0142161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTCT ATCTGGCGGA GTATTTAACC CAATTTTACA CAGGGTTTAA CGTTTTTTCC 
TATGTTACTT TCAGAGCTAT CTTAGGCTTA ATGACTGCAC TTATGTTCAG TCTCTGGTGG
GGCCCTAAGA TGATTGAGCG TTTGCAGATG CTGCAGATTG GTCAAATCGT TCGTAACGAC
GGTCCTGAAT CTCATTTTAG TAAGCGCGGT ACGCCGACTA TGGGAGGAAT ACTGATCCTT
GCTGGTGTAT TTATTAGCGT CTTGCTATGG GGCGATCTTG GCAGCCGATA TGTCTGGGTT
GTCCTGTTTG TTCTGGCAAG TTTTGGATTG ATCGGCTTTA TCGATGACTA TCGTAAAGTG
GTTCGTAAAG ACACTAAAGG TTTGATTGCC AAGTGGAAGT ATATTCTTCA GTCGTTGGCG
GCATTGGTTA TTGCTTTCTA TCTTTATGCG TCGGCTGATA TGACAGGTGA GACCCAGCTT
GTGGTGCCTT TCTTTAAAGA TATCATGCCT CAGCTTGGTG GTTTTTTCAT TGTGTTGGCG
TACTTTACCA TTGTTGGTTC AAGCAACGCG GTGAACTTAA CCGATGGCCT TGATGGCTTA
GCTATCATGC CTACTGTCAT GGTTGCAGCT GCCTTTGCAT TAATCGCTTA CCTCTCTGGT
CATGTCCAGT TTGCTAACTA CCTGCATCTT CCGTACTTGC CTGGTGCTGG TGAGCTCGTG
ATTGTTTGTA CAGCGATAGT CGGTGCCGGT TTAGGTTTCC TCTGGTTTAA CACCTACCCA
GCTCAGGTCT TTATGGGGGA TGTTGGTTCA CTCTCTTTAG GCGCTGCATT AGGTGCAATT
GCTGTTTTGG TTCGCCAAGA GATCTTATTA GTGATCATGG GGGGGGTCTT CGTGATGGAG
ACGGTATCTG TGATTTTACA GGTGGGCTCT TACAAGTTAC GCGGACAACG GATATTTCGT
ATGGCGCCAA TCCATCACCA CTATGAGTTG AAGGGATGGC CAGAGCCAAG GGTGATTGTT
CGTTTTTGGA TTATCTCACT CTTTCTAGTC CTGCTTGGAC TGGCTACGTT GAAATTAAGG
TAA
 
Protein sequence
MLVYLAEYLT QFYTGFNVFS YVTFRAILGL MTALMFSLWW GPKMIERLQM LQIGQIVRND 
GPESHFSKRG TPTMGGILIL AGVFISVLLW GDLGSRYVWV VLFVLASFGL IGFIDDYRKV
VRKDTKGLIA KWKYILQSLA ALVIAFYLYA SADMTGETQL VVPFFKDIMP QLGGFFIVLA
YFTIVGSSNA VNLTDGLDGL AIMPTVMVAA AFALIAYLSG HVQFANYLHL PYLPGAGELV
IVCTAIVGAG LGFLWFNTYP AQVFMGDVGS LSLGAALGAI AVLVRQEILL VIMGGVFVME
TVSVILQVGS YKLRGQRIFR MAPIHHHYEL KGWPEPRVIV RFWIISLFLV LLGLATLKLR