Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4531 |
Symbol | |
ID | 6118897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5494375 |
End bp | 5495031 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641636102 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001762876 |
Protein GI | 170728850 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1589] Cell division septal protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0127742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000127547 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGCTT GGAAGCTAAA CCTGGTTGTT AATGATGCAG ATGCTTTGCC GATTGAAGCA GTAGCCATCA AGGGGGAACG TGATAAAACC TCAGATGAGG AGATACAGGC TGCCCTGCGT GACTTGATGC AACGTAGCTT CTTCTCTGCC GATGTGAATC AGGTTCAGGC TGCGCTAGAG GCACTGCCTT GGGTATATCA GGCTTCGGTG AGACGTGAGT GGCCAGCAAA GTTAAAGGTC TACCTCGTGG AGCAGCAGGT GGTTGCTCAT TGGAATGGCG ATGCTTGGCT CAATATTCAT GGACAGGTAT TCGACGCTCC TAAAAGAGAG AGTGTTGGCA CTCTGCCCTT GCTAGCGGGA CCTGAAGGTC AGTCGAAATT AGTGTTAACC ACATTTCGTC AGCTAAGTGA GCTTTTAAAG ATTAATGGCT TCAATTTACA CAGTTTAAGT TTAAGCCCAA GACACGCTTG GCATGCATCA CTGGATAACG GGATCATGCT TGAGTTGGGT CGAGAAGATA AGATGGCAAG GATACAGCGG TTTATCAACG TCTATCCCAC GTTGGAAAAG CAATCAAAAA GTGTTGCTAA AGTTGATTTG CGTTACGACA CCGGATTAGC CGTAGGTTGG AAAAATGCAC AAGAAGAGAG CCACTAA
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Protein sequence | MAAWKLNLVV NDADALPIEA VAIKGERDKT SDEEIQAALR DLMQRSFFSA DVNQVQAALE ALPWVYQASV RREWPAKLKV YLVEQQVVAH WNGDAWLNIH GQVFDAPKRE SVGTLPLLAG PEGQSKLVLT TFRQLSELLK INGFNLHSLS LSPRHAWHAS LDNGIMLELG REDKMARIQR FINVYPTLEK QSKSVAKVDL RYDTGLAVGW KNAQEESH
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