Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4528 |
Symbol | lpxC |
ID | 6118894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5490787 |
End bp | 5491704 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641636099 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_001762873 |
Protein GI | 170728847 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000171794 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000235543 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATTTTTC AAAGAACTGT TAAAGAAATG GTGAAAACAA CCGGAGTCGG ATTGCATTCC GGCAATAAGG TGACTTTGAG CATCAAGCCC GCACCTGTAA ATTACGGCAT TGTATTAGTG CGTACGGATC TGGAGCCAGC AGTTTCAATC CCTGCTAAGG CTGATCAAGT TCGTGAAACC ACTATGTGTA CTGCGCTAGT TAATGACGAT GGTGTACGTA TCTCGACGAT TGAGCATCTG TTTGCTGCTT TAGCGGGTCT AGGTATTGAT AATGCATTGA TTGAAGTCGA TGCACCTGAG ATCCCGATCA TGGATGGCAG TGCCAGTCCA TGGGTATTCC TACTTCAATC TGTAGGAATT CAAGAGCAAT CAGCGGCTAA GAAATATCTA AGAATCAAAG ACACTATCCG TGTTGAAGAT GGAGACAAAT GGGCGGAGCT AAAACCGTTT AATGGCTTTA GAGTGGATTT TGCAATCGAC TTTAACCACC CTGAAATTGC CCGTAGTCAG CAACATATGG TGATGGATTT TTCAACTTCA GCATTCGTAC GCGATATTAG TAGAGCAAGA ACGTTTGGCT TTATGCGCGA TATCGAATAC TTAAGAGCTA ACAACTTAGC CTTAGGCGGA AGTATGGAAA ATGCAGTCGT GCTTGACGAA TATAAAGTCC TCAACCCCGA TGGCTTGCGT TATGAGGATG AGTTCGTTAA GCATAAGATT TTGGATGCAT TCGGTGACTT ATATGTTGCT GGTCATGCCA TTGTTGGTGA GTTTTGTGCT TTCAAAACGG GCCATGCACT GAATAATCAA TTAGTGCGTG CACTACTAGC TCAACAAGAT GCTTGGGAGC TAGTTAGTTT TGAGAAAGAT GAAGCGCCAG TTAGCTTCTC TGTTCCCGCC GGTGCGGTAT TCGCTTAA
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Protein sequence | MIFQRTVKEM VKTTGVGLHS GNKVTLSIKP APVNYGIVLV RTDLEPAVSI PAKADQVRET TMCTALVNDD GVRISTIEHL FAALAGLGID NALIEVDAPE IPIMDGSASP WVFLLQSVGI QEQSAAKKYL RIKDTIRVED GDKWAELKPF NGFRVDFAID FNHPEIARSQ QHMVMDFSTS AFVRDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YKVLNPDGLR YEDEFVKHKI LDAFGDLYVA GHAIVGEFCA FKTGHALNNQ LVRALLAQQD AWELVSFEKD EAPVSFSVPA GAVFA
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