Gene Swoo_4527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4527 
Symbol 
ID6118893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5490227 
End bp5490679 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content45% 
IMG OID641636098 
Producthypothetical protein 
Protein accessionYP_001762872 
Protein GI170728846 
COG category[S] Function unknown 
COG ID[COG4701] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000460771 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000198081 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAAGC CCCCACAAGA CCTAAGTCAG TTACTGCATC AACGTGGACA ACTGCCCAAT 
ATCGCTGAAA AAGCTGAACT GCTTATGCAC TTAGATTATT ACGTCAAACA AGTGCTAACA
GGTCCGGTAT CGGAGCAACT TAAAGTTGCT AATTTCCGAC AGGGTGTTTT AGTTATTGAA
ACAACAACTG CTGCATGGGC CGCAAGAATA AACTTCCAAA AGACCAAAGT TTTACAACAG
CTGCAAGCCG AAACGCTCCC CATGCTCTCT GCTATCGAAG TTAAAGTCAA CCCGAGTCTG
TTAATGTACG CAACAAAAGC GAAGGAAAAC CATAACCAGA TCACACAGGC CGCAGCCACA
CATATCGAGG CATTGGCAGA ACACGCAGAA GGTTCTCTTG CGATTAAACT AAAACGGCTG
GCTGCATTAG CCAGCCGTTC AAGGCAATCT TAG
 
Protein sequence
MKKPPQDLSQ LLHQRGQLPN IAEKAELLMH LDYYVKQVLT GPVSEQLKVA NFRQGVLVIE 
TTTAAWAARI NFQKTKVLQQ LQAETLPMLS AIEVKVNPSL LMYATKAKEN HNQITQAAAT
HIEALAEHAE GSLAIKLKRL AALASRSRQS