| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4522 |
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| Symbol | |
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| ID | 6118878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5470442 |
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| End bp | 5472022 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641636084 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001762868 |
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| Protein GI | 170728842 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.121498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAGCT CTACGGCAAC TTTACATGAA TCTCAATCAG CCCCGCAAGG CTTTGAGTCT
GGCAGCCTGC GTTCCTGGGT CGCTGTCTTT GCTGGTTTAA TTGGCGCATT TATGGCGATA
CTGGACATCC AGATCACTAA TGCTTCAATG AAGGAGATAC AGGGAAGTTT AGGTGCAACC
TTAGAGGAGG GTTCTTGGAT AGCAACCGCT TATCTGGTAG CTGAGATGAT AGCCATACCT
CTCTCAGGCT GGCTAAGCCA AGGGCTTTCA GTTAGACGTT ACCTTCTCTG GACAACAGCT
TTTTTTATCG GCGCCTCACT CCTGTGTTCA ATAGCTTGGA ACCTCGAGTC CATGATCGCC
TTTAGGGCAA TGCAAGGCTT CTTCGGTGGT GCACTTATCC CCTTAGCCTT TCGACTAATC
CTCGAGCTAC TCCCCGAGAG TAAGCGCGCT ATAGGCATGG CGCTTTTTGG GGTAACTGCA
ACTTTTGCCC CCTCAATCGG CCCCACTTTA GGTGGCTGGT TAACTGAGCA ATTTAGCTGG
CATTACCTTT TCTATATCAA TGTTCCCCCA GGATTAATTG TAATGGGAAT GCTCGCCTAT
GGGCTGGAGA AAAAACCGGT TCTCTGGGAC AAACTAAAAA ATATCGACCT ATCTGGCATA
ATTACTATGG CGCTAGGAAT GGGCTGTTTA GAGGTGGTAT TAGAAGAGGG AAACCGTAAA
GATTGGTTTG GCTCAGACCT TATCCGTGAT CTCACTATTG TCGCCGTAAT TAACATCACT
CTTTTTGTCT ATATCCAGCT AAAAAAAGAG GAGCCACTAG TTAACCTTCG CTTATTAGGT
CAGCGTGATT TCGCCATCTC AACCATTGCC TATTTTCTAT TGGGTATGGC TCTGTTTGGT
GCCATCTACA TGATCCCTCT CTATTTAGCA CAGATCCACA ACTACAGCCC ATTAGACATA
GGTGAAGTGA TCATGTGGAT GGGTTTTCCT CAGCTACTGG TACTGCCATT TATACCAAAG
CTTATGGAAC GATTCGATGG CCGCTACTTG GCAGCATTTG GATTCACCAT GTTCTCATTA
AGCTATTATA TGAATAGCCA TATGACAGCA GACTATGCGG GTGATCAGAT GATCGCCTCA
CAAATCGTAA GAGCCTTAGG ACAACCATTT ATTCTGGTTC CAATAGGGAT CATAGCTACC
ATGCATATTA AACCTCATGA GAATGCGTCG GCCTCAACAG TGCTTAACGT TATGCGAAAC
TTGGGAGGCG CATTTGGTAT CGCACTAGTA TCGACCCTAA CCGATACTCT CTCAAGAGGT
CATCTTGCCC ACATAAAAGA GACACTGTCC GCAGTAAACC CAATGGCAAA TCAGTACCTA
AATCAAACAA CGAGCATCTT AGTACAAGCG GGCTCAGATC CCGTAACAGC ATCCTCTCAG
GCTGCTGTAA TGCTTGGAAA AACCATGACT GAACAAGCCT ATATCCAAGC TTACAATGAT
GTATTTTTTA TTATCTCTGC ACTCCTGCTT ATTGCAGTCG TTGCTGTACT CTCGATTAGA
AAACCGATAA AAGAGCGATA G
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| Protein sequence | MSSSTATLHE SQSAPQGFES GSLRSWVAVF AGLIGAFMAI LDIQITNASM KEIQGSLGAT
LEEGSWIATA YLVAEMIAIP LSGWLSQGLS VRRYLLWTTA FFIGASLLCS IAWNLESMIA
FRAMQGFFGG ALIPLAFRLI LELLPESKRA IGMALFGVTA TFAPSIGPTL GGWLTEQFSW
HYLFYINVPP GLIVMGMLAY GLEKKPVLWD KLKNIDLSGI ITMALGMGCL EVVLEEGNRK
DWFGSDLIRD LTIVAVINIT LFVYIQLKKE EPLVNLRLLG QRDFAISTIA YFLLGMALFG
AIYMIPLYLA QIHNYSPLDI GEVIMWMGFP QLLVLPFIPK LMERFDGRYL AAFGFTMFSL
SYYMNSHMTA DYAGDQMIAS QIVRALGQPF ILVPIGIIAT MHIKPHENAS ASTVLNVMRN
LGGAFGIALV STLTDTLSRG HLAHIKETLS AVNPMANQYL NQTTSILVQA GSDPVTASSQ
AAVMLGKTMT EQAYIQAYND VFFIISALLL IAVVAVLSIR KPIKER
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