Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4513 |
Symbol | |
ID | 6118869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5457956 |
End bp | 5458981 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636075 |
Product | OmpA domain-containing protein |
Protein accession | YP_001762859 |
Protein GI | 170728833 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.17802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.652887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT CACTTCTAGC TATCGCATTA ATGAGCACTT TCTCATACGC CAATGCAGCA GACGTTGATA ACACTTGGTA CATCGGCGCT GGTGCAGGCC AGAGCAACTA TGAGTCAGTA GATGCCGTTA GTCATCTAGG TGACGATAGC GACTTAGCAT GGAACGCTGT AGTTGGTTAC CAGTTAAATA AATATTTCGC AGTCGAAGCT GGCTGGCAAG ATCTTGGCAC TAATGATGAT ACTCATCTTT GGGGCGGACT TGACGGCGCT CAATCTATCG ACGTAGATGG CTTCACTCTT GGCTTAGTCG GTACACTACC ACTAAGTGAA AAGTGGTTCC TAACCGGTGA AGCTGGTGCT TACCAGTACC ACTTAGCTCA CCAGATGAGT GCTGACAAAT ATGTTAGTGC AACTGATACC GCGCCTTACT TTGGTGCCGG TGTTGGCTAC AAGATCACTG ATTCGTTAGA AGTTTCAGCT AAATACCGTC GCTTCGCTAA CATCGACGAG TCAGCTTGGA ACACAGCGAA CATGGACGCA CAAACCGTTG GTATTCAAAT GGTTTACCGT TTCGGTGTTA AACCAACGCC AACAACGGCA GCTGTTGTAT TACCTGCAGT GATCAAAGAG ACTAAGCCTG CGCCTCGTCC AGAGCCAGTG TATGAGACTA AAATAGAGCA AAGCAGTGTT GCAGTGCTAT TTGGTTTCGA TTCTTCAAGC CTAAGCAGCA CAGCTAAGGC GAAATTGGAT GAAGTGATCC GTCTTTCTAA GCAAAGCGAT AACGACACCA TCTTGCTAAA TGGCCAATCA GATAACCAAG GTGATTCTGA ATATAACCAA AAGCTATCTG AAGCTCGTGT TCAACAAGTT GCAGATTACC TCAATGCTAA CGGTGTTGAA GTACAAACTT TAGAGCAGCA AGCGACTGGC GAGCAAAATG CACACGCTAA CTCACGCACA GATCGTGCAC TTGAGCGTCG CGTTATCATC ACGCTAACCA GTGAAACTCA AGTAGTCGTG TCTTAA
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Protein sequence | MKKSLLAIAL MSTFSYANAA DVDNTWYIGA GAGQSNYESV DAVSHLGDDS DLAWNAVVGY QLNKYFAVEA GWQDLGTNDD THLWGGLDGA QSIDVDGFTL GLVGTLPLSE KWFLTGEAGA YQYHLAHQMS ADKYVSATDT APYFGAGVGY KITDSLEVSA KYRRFANIDE SAWNTANMDA QTVGIQMVYR FGVKPTPTTA AVVLPAVIKE TKPAPRPEPV YETKIEQSSV AVLFGFDSSS LSSTAKAKLD EVIRLSKQSD NDTILLNGQS DNQGDSEYNQ KLSEARVQQV ADYLNANGVE VQTLEQQATG EQNAHANSRT DRALERRVII TLTSETQVVV S
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