| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4513 |
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| Symbol | |
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| ID | 6118869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5457956 |
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| End bp | 5458981 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636075 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_001762859 |
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| Protein GI | 170728833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.17802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.652887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CACTTCTAGC TATCGCATTA ATGAGCACTT TCTCATACGC CAATGCAGCA
GACGTTGATA ACACTTGGTA CATCGGCGCT GGTGCAGGCC AGAGCAACTA TGAGTCAGTA
GATGCCGTTA GTCATCTAGG TGACGATAGC GACTTAGCAT GGAACGCTGT AGTTGGTTAC
CAGTTAAATA AATATTTCGC AGTCGAAGCT GGCTGGCAAG ATCTTGGCAC TAATGATGAT
ACTCATCTTT GGGGCGGACT TGACGGCGCT CAATCTATCG ACGTAGATGG CTTCACTCTT
GGCTTAGTCG GTACACTACC ACTAAGTGAA AAGTGGTTCC TAACCGGTGA AGCTGGTGCT
TACCAGTACC ACTTAGCTCA CCAGATGAGT GCTGACAAAT ATGTTAGTGC AACTGATACC
GCGCCTTACT TTGGTGCCGG TGTTGGCTAC AAGATCACTG ATTCGTTAGA AGTTTCAGCT
AAATACCGTC GCTTCGCTAA CATCGACGAG TCAGCTTGGA ACACAGCGAA CATGGACGCA
CAAACCGTTG GTATTCAAAT GGTTTACCGT TTCGGTGTTA AACCAACGCC AACAACGGCA
GCTGTTGTAT TACCTGCAGT GATCAAAGAG ACTAAGCCTG CGCCTCGTCC AGAGCCAGTG
TATGAGACTA AAATAGAGCA AAGCAGTGTT GCAGTGCTAT TTGGTTTCGA TTCTTCAAGC
CTAAGCAGCA CAGCTAAGGC GAAATTGGAT GAAGTGATCC GTCTTTCTAA GCAAAGCGAT
AACGACACCA TCTTGCTAAA TGGCCAATCA GATAACCAAG GTGATTCTGA ATATAACCAA
AAGCTATCTG AAGCTCGTGT TCAACAAGTT GCAGATTACC TCAATGCTAA CGGTGTTGAA
GTACAAACTT TAGAGCAGCA AGCGACTGGC GAGCAAAATG CACACGCTAA CTCACGCACA
GATCGTGCAC TTGAGCGTCG CGTTATCATC ACGCTAACCA GTGAAACTCA AGTAGTCGTG
TCTTAA
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| Protein sequence | MKKSLLAIAL MSTFSYANAA DVDNTWYIGA GAGQSNYESV DAVSHLGDDS DLAWNAVVGY
QLNKYFAVEA GWQDLGTNDD THLWGGLDGA QSIDVDGFTL GLVGTLPLSE KWFLTGEAGA
YQYHLAHQMS ADKYVSATDT APYFGAGVGY KITDSLEVSA KYRRFANIDE SAWNTANMDA
QTVGIQMVYR FGVKPTPTTA AVVLPAVIKE TKPAPRPEPV YETKIEQSSV AVLFGFDSSS
LSSTAKAKLD EVIRLSKQSD NDTILLNGQS DNQGDSEYNQ KLSEARVQQV ADYLNANGVE
VQTLEQQATG EQNAHANSRT DRALERRVII TLTSETQVVV S
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